Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1683 |
Symbol | |
ID | 4580091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1665055 |
End bp | 1666566 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639768997 |
Product | ABC transporter related |
Protein accession | YP_915476 |
Protein GI | 119384420 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0305806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.363885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGACC GGACCAGCGC CTGGCATGGC GAATACATTC TGGAAGTCGA CAACATCACC AAGGAATTCC CGGGCGTGAA GGCCCTGGAC GGGGTGCAGC TGAAGATCCG CCCCGGCACC GTCCATGCGC TGATGGGCGA GAACGGCGCC GGGAAATCCA CGCTGATGAA GATCATCGCC GGCGTCTATA CGCCCGATGG CGGCGAGGTG CGCTTTGCCG GGCAGCCGCT GGATGTCAGG ACGCCGCTCG ACGCGCTGAA CTCGGGCATC GCCATGATCC ACCAGGAACT GAACCTGATG AACTGGATGA CGGTGGCCGA GAACATCTGG ATCCGGCGCG AGCCGCTGAA CCGGCTGGGG CTGGTCGATC ACGGCAGGAT GCGGCAGATG ACGGCCGAAC TGCTGGGCCG GCTGAACATC CGCCTGGACC CCGACCAGCA GGTCGGCGAA CTGACCGTGG CGCAAAAGCA GATGGTCGAG ATCGCCAAGG CGGTTTCCTA CAATTCCGAC GTGCTGATCA TGGACGAGCC GACCAGCGCC ATCACCGAGG CCGAGGTCGA GCATCTGTTC GCCATCATCC GCGACCTGAA GTCGCGCGGC ATCGGCATCG TCTACATCAC CCACAAGATG AACGAGCTGT TCGAGATTGC CGACGAGTTC ACCGTCTTTC GCGACGGCAA GTATGTCGGC ACCCATCCCA GCGCCGACGT GACCCGCGAC GACATCATCC GCATGATGGT CGGCCGCGAG ATCACCGAGA TGTTCCCCAA GATCGATTGC GAGATCGGCG AGACCGTGCT CGAGGTCAGG AACCTGACCC TGCCGGGCGT GTTCCACGAC GTCAGCTTCC AGGTCCGCGC CGGCGAGATC CTGGGCATCG CCGGGCTGGT CGGCTCGAAG CGCTCGAACG TGGCCGAGGC GATCTTCGGC GTCCATCCCG CGCCCATCGG CGACATCCTG ATCGACGGCC GGCATGTGCA GATCACCTGT CCCTCGGACG CCATGGGGCA TGGCATGGCC TTCCTGACCG AGGACCGCAA GGAAAGCGGT TGCTTCCTGA TCCTCGATTG CCTGGAAAAC ATCCAGTCGG CGCTGATCAC CAGAAGCCAT GTGAAAAACG GCTTCATCGA CCTGCGGACC GTCGCCGCCA AGGCCGAGGA GATGGCCGCG ACGCTGCGCA TCAAGACACC CAGCCTGCGC GAGACGGTCG AGAACCTGTC GGGCGGCAAC CAGCAGAAGC TGCTGATCGC TCGCTGGCTG CTGACCGAAC CGCGCATCCT GATCCTGGAC GAGCCCACCC GCGGCATCGA CGTGGGCGCC AAGGCGGAAA TCCACCGCCT GATCACCAAG CTGGCCGCGC AGGGCGTGGC CGTCATCATG ATTTCCTCGG AAATGCCCGA GGTCTTGGGA ATGAGCGACC GCATCATGGT CATGCACGAG GGCCATGTGT CGGGCTTTCT CGACCGGGCC GAGGCCGATC AGGTCAAGAT CATGTCGCTG GCCGCCAAGT AA
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Protein sequence | MLDRTSAWHG EYILEVDNIT KEFPGVKALD GVQLKIRPGT VHALMGENGA GKSTLMKIIA GVYTPDGGEV RFAGQPLDVR TPLDALNSGI AMIHQELNLM NWMTVAENIW IRREPLNRLG LVDHGRMRQM TAELLGRLNI RLDPDQQVGE LTVAQKQMVE IAKAVSYNSD VLIMDEPTSA ITEAEVEHLF AIIRDLKSRG IGIVYITHKM NELFEIADEF TVFRDGKYVG THPSADVTRD DIIRMMVGRE ITEMFPKIDC EIGETVLEVR NLTLPGVFHD VSFQVRAGEI LGIAGLVGSK RSNVAEAIFG VHPAPIGDIL IDGRHVQITC PSDAMGHGMA FLTEDRKESG CFLILDCLEN IQSALITRSH VKNGFIDLRT VAAKAEEMAA TLRIKTPSLR ETVENLSGGN QQKLLIARWL LTEPRILILD EPTRGIDVGA KAEIHRLITK LAAQGVAVIM ISSEMPEVLG MSDRIMVMHE GHVSGFLDRA EADQVKIMSL AAK
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