Gene Pden_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1596 
Symbol 
ID4580203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1575380 
End bp1576246 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID639768913 
ProductABC-3 protein 
Protein accessionYP_915392 
Protein GI119384336 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0434418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACG GGGTCGTGGC GCCCTTCATG GAATTCGCCT TCATGCAGCG GGCGCTGGCG 
GGGGCGCTGC TGCTGTCGCT CTCGGCCTGC CCGGTCGGGG TCTTCCTGAT GCTGCGCCGG
ATGAGCCTGA CCGGGGACGC CATGTCCCAT GCCATCCTGC CGGGCGCGGC GGCGGGCTTC
ATGCTTTACG GGCTGGAGAT TGTGCCGATG ACCATCGGCG GGCTGATCGC GGGCGCCATC
GTGGCGCTTG GCGCCGGCGC CGTGGCACGG CTGACGGTGC AGAAGGAGGA CGCCTCGATG
GCGGCTTTCT ACCTGGTTTC GCTGGCCATC GGGGTCGTCA TGGTCAGCCT GCGCGGCTCC
AGCGTCGATC TGATGCATGT TCTGTTCGGC ACGGTGCTGG CGCTGAACGA CGATGCGCTG
TGGCTGATCG GGCTTGTCGC CTCGGTCACG CTGGCGACCA CGGTGCTGCT GTGGCGCGCG
CTGGTGGCGG AGTGCCTCGA CCCGCTGTTC CTGCGCTCGG TCTCGCGCCT CGGCGGGGCG
GTGCATTTCG CCTTTCTGGG GCTGGTGGTG CTGAACCTCG TCGCGGGGTT TCAGGCGCTC
GGCACGCTGC TGTCGGTGGG GCTGATGATC CTGCCCGGTG CTGCGGCGCG GTTCTGGGTG
AACGATGTCC TGGCGATGTG TGTCGTCTCG GTCGGGATCG GCATCGTCTC CTCGCTGGGC
GGGCTCTTGC TGTCCTATCA CGCCAGCCTC CCCTCGGGAC CGGCGATCAT CCTCTCGGCC
GGGGTGGTCT ATCTCGTCTC GCTTCTGGCG GGGCCGCGCG GCGTGCTGCG GCCCGCCCTG
CCCCGCCGCC ATCATCGGAC GGCCTGA
 
Protein sequence
MVDGVVAPFM EFAFMQRALA GALLLSLSAC PVGVFLMLRR MSLTGDAMSH AILPGAAAGF 
MLYGLEIVPM TIGGLIAGAI VALGAGAVAR LTVQKEDASM AAFYLVSLAI GVVMVSLRGS
SVDLMHVLFG TVLALNDDAL WLIGLVASVT LATTVLLWRA LVAECLDPLF LRSVSRLGGA
VHFAFLGLVV LNLVAGFQAL GTLLSVGLMI LPGAAARFWV NDVLAMCVVS VGIGIVSSLG
GLLLSYHASL PSGPAIILSA GVVYLVSLLA GPRGVLRPAL PRRHHRTA