Gene Pden_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1593 
Symbol 
ID4580856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1571549 
End bp1573090 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content68% 
IMG OID639768910 
ProductPpx/GppA phosphatase 
Protein accessionYP_915389 
Protein GI119384333 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.229117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0470095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCA TCGTGACCGC AAGCGGAGAA ACCATCGAAC CCTTCGGGCG CTCGCTGTTC 
GAGCGCGCCT CGGAACGGGC ATTGAGCCGG GTCGGCGTGG TCGACGTGGG CTCGAACTCG
ATCCGCATGG TGGTCTTTGA CGGGGCGGCG CGTTCGCCGG CCTATTTCTA CAACGAAAAG
GTCATGGCCG GGCTGGGCTC GGGCCTTGCC ACCACCGGCC GGCTGAACCC CGAGGGGGTG
CGCCGCGGCA TGGCGGCGCT GCGCCGTTTT GCGGTCCTGG CCGACAGCAT GGGGATCAAG
CCGCTGACCT GCGTCGCCAC CGCCGCCGTG CGCGAGGCCG AGGACGGCCC GGCCTTTCGC
AAGGCGGTCG AGAAGGAGAC CGGGCTGAAG CTTCTGGTCA TCGACGGTGA GGAGGAGGCG
CGGCTTTCCG CGCAGGGCGT CCTGCTGGGC TGGCCGGAGG CCAAGGGGCT GGTCTGCGAC
ATCGGCGGCA ACTCGATGGA ACTGGCCGAG GTGGCGAACG GCAAGGTCGG CCGCCGCATC
TCGACGCCGC TGGGTCCGTT CCGGCTGCAA CAGGTCAAGG GTGGCGCCTC GGGCCTGCGC
GACCATATCC GCGATACCAT CGAGGCCGCA GCAGAGCGGC TGGGGCGCGG GCACGAGCAG
ATCTATCTGG TCGGCGGCTC GTGGCGGGCC ATCTCGCGGC TGGACATGGA ACGGGCGAAA
TACCCCATGA CCGTGCTGCA CGAATACCGC ATGTCGCCCC AGGCCGTCGC CGATACGGTG
AAATGGATCG GCGACAAGAC CGTCACGGAA ATGCGGACGA TGACCGGCAT TTCGCAAGGC
CGGATGGAGC TGGTGCCGCT GGCCAGCCAG GTGCTGCGCC AACTGGTGCA AAGCCTCAAG
CCGAAATCGC TGGCCGTGTC CTCCTATGGC ATCCGCGAGG GGCTGCTTTA CGAACAGATG
CCGACCGGCT TGCGCTCTCG CGATCCGCTG ATCGAGGCGG CGCGCTTTGC CGAGCGGCAG
ATGGCGCGGA TGCCGGGCTT CGGCAAGAAG CTCTATCACT TCCTGGAGCC GCTGTTCGGC
GACCTGCCGC CCGAGCGCGA CCGGCTGGTC AAGGCGGCCT GCCTGCTTCA CGACACGACC
TGGCGGACCC ATCCCGATTA TCGCGCCGAT GCCTGCTTCG ACAACGTGAC GCGGGCCAAC
ATGGCGGCGC TGTCGCATCC CGAGCGGGTG TTCCTGGGCC TGTCGCTGCT GCATCGCTAC
AAGAACAGCC GCGCCAATTC GCCCATGGCG CCGCTTTTCG CCCTGCTTTC CGAGAAGGAG
ATCCGCGAGG CGGAGGTGCT GGGCAAGGCC CTGCGTTTCG GCGCCATGTT CTCGGTCAAG
GATCCGGCCG AGGCGGGGAC GCTGAAGCTT CAGCGCAAGA AGAAGCAGCT GGAACTGAAG
CTGACGAGGA CCGGGCGGGC GCTGCTGGGC GAGGTGGCCG AGGCGCGGTT CCGCGCGCTT
GCCGAAGCCA TGGGCGTCGC GCCGGTGGTG ACCGAGGGCT AA
 
Protein sequence
MNGIVTASGE TIEPFGRSLF ERASERALSR VGVVDVGSNS IRMVVFDGAA RSPAYFYNEK 
VMAGLGSGLA TTGRLNPEGV RRGMAALRRF AVLADSMGIK PLTCVATAAV REAEDGPAFR
KAVEKETGLK LLVIDGEEEA RLSAQGVLLG WPEAKGLVCD IGGNSMELAE VANGKVGRRI
STPLGPFRLQ QVKGGASGLR DHIRDTIEAA AERLGRGHEQ IYLVGGSWRA ISRLDMERAK
YPMTVLHEYR MSPQAVADTV KWIGDKTVTE MRTMTGISQG RMELVPLASQ VLRQLVQSLK
PKSLAVSSYG IREGLLYEQM PTGLRSRDPL IEAARFAERQ MARMPGFGKK LYHFLEPLFG
DLPPERDRLV KAACLLHDTT WRTHPDYRAD ACFDNVTRAN MAALSHPERV FLGLSLLHRY
KNSRANSPMA PLFALLSEKE IREAEVLGKA LRFGAMFSVK DPAEAGTLKL QRKKKQLELK
LTRTGRALLG EVAEARFRAL AEAMGVAPVV TEG