Gene Pden_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1566 
Symbol 
ID4580868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1540248 
End bp1541015 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content78% 
IMG OID639768882 
Productcobalamin 5'-phosphate synthase 
Protein accessionYP_915362 
Protein GI119384306 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.212563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0205938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTAGGC CGCTGGCCGA GACGGCGCTG GCGCTGGTCT GGCTGACCCG GCTGCCCGTG 
GGGCGGCTGT TGCCCGTCCC GACGCCGGCG CTGGCGCAGG CGGCATGGGC CTTTCCGCTG
GTCGGGCTGG CCGTCGGGCT GATCGGCGCC GCCGTGCTGG GGCTGGCCGC CCTTGCCGGG
TTGCCGGCGC TGGTCGCGGC GCTGCTGGCG GTGGGCGCCA TGATCCTTGC CACCGGCGGG
CTGCACGAGG ACGGTCTGGC CGATTGCGCC GACGGCAGCG GCGGCGGGAC GCGAGAGCGG
CGGCTGGAAA TCATGCGCGA TTCCCGCATC GGCAGCTATG GCGTGCTGGC GCTGGTGCTG
ACGGTCGGGT TGCGCGTGGC GGCCATCGCG GCGCTTGCCG GCGATCCGTG GCTGGCGGCG
GCGGCCGTGA CCGGGCTGGC GGCGGCGTCG CGGGCCGGCA TGGCGGCGGG GTTGGGGCTG
ATGCCGCCGG CGCGGCCCGA CGGCCTTGGC CATGCGGCGG GGCGGCCGAC GCGCGGCGTG
GTCCTGGCCG CGCTGGCACT GGGGGGTGCG GCGCTGCTGC TGCCGGCGCT TTGCCTGCCG
CTTCCGGTCG CCGGCTGGGC GGTGCCGGTC GCGGCGGTGG CGACGGCGCA GCTGTGGCTT
GCCCGCCGGG CCATGCGGGC GCTTGGCGGC CAGACCGGCG ACGTGCTGGG CGCCATGCAG
CAGGCGGGCG AGACGGCCGG GCTGGTCGTG CTGACGGCGC TCGTCTAG
 
Protein sequence
MARPLAETAL ALVWLTRLPV GRLLPVPTPA LAQAAWAFPL VGLAVGLIGA AVLGLAALAG 
LPALVAALLA VGAMILATGG LHEDGLADCA DGSGGGTRER RLEIMRDSRI GSYGVLALVL
TVGLRVAAIA ALAGDPWLAA AAVTGLAAAS RAGMAAGLGL MPPARPDGLG HAAGRPTRGV
VLAALALGGA ALLLPALCLP LPVAGWAVPV AAVATAQLWL ARRAMRALGG QTGDVLGAMQ
QAGETAGLVV LTALV