| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1415 |
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| Symbol | secF |
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| ID | 4581280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1382886 |
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| End bp | 1383878 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639768731 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_915212 |
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| Protein GI | 119384156 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.661465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTC GTCTGAAACT CGTTCCCGAC AACACATCCT TCAACTTCTT CCGCTGGCAG
TGGCTGACTT TCGGCGTCTC GGCCGCGGCC ATGGTCGGCT CGGTCCTTGT CCTGCTGGTG
ATGGGGCTGA ACTTCGGCAT CGACTTCAAG GGCGGCACCA CCATCCGCAC CGAAAGCCCG
ACGGCCTTCG AGGTCGGCGA ATACCGGCAG GCGATGAGCG ATCTGGACCT GGGCGACGTC
TCGATCACCG AGGTATTCGA CCCCAGCTTC GGCGAGACCA AGCATGTCGC GATGATCCGC
ATCGGCACCA CGGACGAGAC CGGCTCGGTC ACGCCCGCAC AGCTGAACGA GATCGAGGCA
GCGCTGAAGA CCGTCGACCC GCAGGTGGCC TTCGCTGCGG TGGAATCGGT CGGTCCCAAG
GTCTCGGGCG AGCTGATCAA GACCGCCCTT TACGCCGTGG GCGCGGCGAC CATCGGCATC
ATGTTCTACA TCTGGCTGCG CTTCGAATGG CAGTTCGCGC TGGGGGCGGT GATCTCGCTG
ATCCATGACG TGCTGCTGAC GGTCGGGCTG TTCTCGCTGT TCCAGCTGCG CTTCGACCTG
ACCACCATCG CGGCGCTGCT GACGACGCTG GGCTTTTCGT GCAACGATAC GGTCGTGGTC
TTCGACCGGC TGCGCGAGAA CCTGATCAAG TACAAGACGC GGCCGCTGCT CGACCTGATG
AACCTGACCT GCAACGAGAC GCTGTCGCGC ACGATCATGA CGGCCGTCAC TACCGGCATC
GCCCTGACCG CGATGCTGAT CTTTGGCGGC GACGTGATCC GCGACTTCGT CATCGCCATG
CTTTGGGGCG TGATCGTCGG CTGCTATTCG ACGATCTATG TCGCCAAGAA CATCGTGCTG
TGGCTGGGCG TCAAGCGCGA CTGGTCCAAG CCCGGTCCCA GCGAAAAGGC ACCGGGCGAG
GACATTCCCG CCGCCTTCCG GGACGCGCCC TGA
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| Protein sequence | MAFRLKLVPD NTSFNFFRWQ WLTFGVSAAA MVGSVLVLLV MGLNFGIDFK GGTTIRTESP
TAFEVGEYRQ AMSDLDLGDV SITEVFDPSF GETKHVAMIR IGTTDETGSV TPAQLNEIEA
ALKTVDPQVA FAAVESVGPK VSGELIKTAL YAVGAATIGI MFYIWLRFEW QFALGAVISL
IHDVLLTVGL FSLFQLRFDL TTIAALLTTL GFSCNDTVVV FDRLRENLIK YKTRPLLDLM
NLTCNETLSR TIMTAVTTGI ALTAMLIFGG DVIRDFVIAM LWGVIVGCYS TIYVAKNIVL
WLGVKRDWSK PGPSEKAPGE DIPAAFRDAP
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