Gene Pden_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1406 
Symbol 
ID4581271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1375897 
End bp1376451 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content70% 
IMG OID639768722 
ProductChaC family protein 
Protein accessionYP_915203 
Protein GI119384147 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3703] Uncharacterized protein involved in cation transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.190446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.342392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAAC GGCGGGAGCA TTGGGTCTTT GCCTATGGCT CGCTGATGTG GGATCCGGGC 
TTTCCCGTGG CCGAGATGGT GTCCGCGCGG CTCGACGGCT ATGCCCGCAG CTTCTGCCTG
CGCTCGGTCG TCTATCGCGG CACCAGCGAG GTGCCCGGGC TGGTCCTGGG CCTGGACGCC
GAGCCGGGCG CGCATTGCCG GGGCCTGGCG CTGCGCGTGG CCGAGCCGGA ATGGGAGGAG
ACGCTGGCCG CCCTGCGCGA GCGCGAATTG ACGACCAACG CCTATGCGGA ACTGTCTCTG
CCCCTGGTGT TGGAGGACGG CCGCGCGGTC GAGGCGGTCG CCTATGTGAT CCGCCGCGAC
CATGACCAAT ATGCCGGCCC CCTGGACCTG CACGAACAGG CCCGGATCAT CGCCCGGGCG
CAGGGCGGGC GGGGGCCGAA CGCGGATTAC CTGTTCAATA CCGCCCGGCA CCTGGCGCAG
ATGGGCATCG AGGACCACGC CATGGACGAA TTGGCGCGGC AGGTGCGCGG CTTGCTGCAT
CCCGGCCGGG AATAG
 
Protein sequence
MGERREHWVF AYGSLMWDPG FPVAEMVSAR LDGYARSFCL RSVVYRGTSE VPGLVLGLDA 
EPGAHCRGLA LRVAEPEWEE TLAALREREL TTNAYAELSL PLVLEDGRAV EAVAYVIRRD
HDQYAGPLDL HEQARIIARA QGGRGPNADY LFNTARHLAQ MGIEDHAMDE LARQVRGLLH
PGRE