| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1380 |
|---|
| Symbol | |
|---|
| ID | 4579811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1347048 |
|---|
| End bp | 1348622 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639768696 |
|---|
| Product | protein of unknown function DUF853, NPT hydrolase putative |
|---|
| Protein accession | YP_915177 |
|---|
| Protein GI | 119384121 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.141103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.574637 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGTA TCGTCGATCT GGACGCCGGA ACGGTCTTCG TCGGTGGCGG TGGGGCGGAT
TACGCGTTGC CGCAGGTGCT ATTGCTGAAA TATGCCAATC GCCACGGGCT GATCGCCGGC
GCGACCGGGA CCGGCAAGAC GGTGACGTTG CAAACGCTGG CCGAATCGTT TTCGCGCGCC
GGCGTGCCGG TCTTCATGGC CGATGTGAAG GGCGACCTGG CCGGGATCGC CGGGCCCGGC
GATCCGAACG GCAAGCTGCA TGACGCTTTC CAGAAGCGCG CCGAAACCAT CGGCATGGCG
CTGGACTATC AGGATTTCCC CGTCACCTTC TGGGATATCT GGGGCGAGCG CGGCCATCCG
GTCCGCACCA CGCCGGCCGA GATGGGGCCG CTGCTTCTGT CGCGGCTGCT GGGGCTGACC
GATGCGCAGG AAGGCGTGAT GAACATCGCC TTCCGCGTCG CCGACGAGCA GGGGCTGGCG
CTGCTGGACA TGAAGGACTT GCAGGCCATG CTGGTCTGGG TCGGCCAGAA CGCCAAGGAA
CTGTCGCTGA AATACGGCAA TGTCTCGACC GCCTCGGTGG GCGCCATCCA GCGCGCGCTG
ATGGTGCTGG AGAACGAGGG CGGCAACCGG CTGTTCGGAG AGCCGGCGCT GGAACTGGCG
GACATGATGC GGCTGGATGC CTCGGGCAAG GGCATGGTGA ACATCCTGTC GGCCGAGAAG
CTGATGAATG CGCCGCGGCT CTATGCCACT TTCCTTTTAT GGCTGATGTC GGAACTTTTC
GAGCAACTGC CCGAGGTGGG CGACCCCGAC AAGCCCCGCA TCGCCTTCTT CTTCGACGAG
GCGCATCTGC TCTTTGACGA CGCGCCGCCG GCGCTGGTGG ACAAGATCGA GCAGGTGGCG
CGGTTGATCC GTTCCAAGGG CGTAAGTCTT TGGTTCATCA GCCAGAACCC GGCCGACTTG
CCGGAATCGG TGCTGGGGCA GCTGGGCAAC CGCGTCCAGC ACGCACTGCG CGCCTTTACC
GCCAAGGACC AGAAGGCGTT GCGGCTGGCG GCGCAGAACT ATCGCCCGAA CCCGGATTTC
GACACGGCCG AGGCGATCCA GGCGGTCGGC ACCGGCGAGG CGGTAACCTC GCTTCTGGAG
GCCAAGGGGG TGCCGGGCGT CGTGCAGCGC ACGCTGATTC GCCCGCCGCT GTCGCGGCTT
GGCCCGATCC CCGATGCCGA GCGCGCGGCG ATCAATGCCG CCTCGCCGAT GGCGCTGAAA
TACGGCCAGG CGCTGGACCG GGAATCGGCG GCCGAGATCC TGGCGAAGCG CGCCGAGGCT
GCCGCCGCGG ACAGCGCCGG GGCAGGGGCC AAGGGCGCGG ATGACGATCT GTGGAAAATG
GATCGCGAAT ATACCCGTGC GCGGCGCTAT GACCCCGGCG CGCGGGTTCC GGCCGAGCCC
AAGCCGCGCG CACGCCGCTC GAACAGCGAT TCGATCGCCG TGACCTTCGG CAAGAGCCTG
GCGCGGCAAC TGGGCACCAA GAGCGGGCAG GCACTGGTGC GCGGCGTGCT GGGTTCGCTG
TTCAGGGGCA AGTGA
|
|---|
| Protein sequence | MTGIVDLDAG TVFVGGGGAD YALPQVLLLK YANRHGLIAG ATGTGKTVTL QTLAESFSRA
GVPVFMADVK GDLAGIAGPG DPNGKLHDAF QKRAETIGMA LDYQDFPVTF WDIWGERGHP
VRTTPAEMGP LLLSRLLGLT DAQEGVMNIA FRVADEQGLA LLDMKDLQAM LVWVGQNAKE
LSLKYGNVST ASVGAIQRAL MVLENEGGNR LFGEPALELA DMMRLDASGK GMVNILSAEK
LMNAPRLYAT FLLWLMSELF EQLPEVGDPD KPRIAFFFDE AHLLFDDAPP ALVDKIEQVA
RLIRSKGVSL WFISQNPADL PESVLGQLGN RVQHALRAFT AKDQKALRLA AQNYRPNPDF
DTAEAIQAVG TGEAVTSLLE AKGVPGVVQR TLIRPPLSRL GPIPDAERAA INAASPMALK
YGQALDRESA AEILAKRAEA AAADSAGAGA KGADDDLWKM DREYTRARRY DPGARVPAEP
KPRARRSNSD SIAVTFGKSL ARQLGTKSGQ ALVRGVLGSL FRGK
|
|---|
| |