| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1377 |
|---|
| Symbol | |
|---|
| ID | 4579808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1344725 |
|---|
| End bp | 1345291 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639768693 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_915174 |
|---|
| Protein GI | 119384118 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0678] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.868488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG GACGAATGAT GAAACAAGGC GATCTGCTTC CCGAAGTGAC CTTCCAGACC
CGCGTGCGCG ACGAATCCGT CGGCGGGCCC AATCCCTATC GCTGGCAGCC GGTCACGACC
GCCGACTACT TCAAGGGCAA GCGCGTGGTT CTGTTCTCGT TGCCGGGCGC CTTTACGCCG
ACCTGCTCGA CCTACCAGCT GCCGGGCTTC GAAAAAGCCG CCGGGGAAAT GGCCGAACTG
GGCATCGATG CGATCTACTG CATGTCGGTC AACGACAGCT TCGTGATGAA CCAATGGGCC
AAGGCGCAGA ACCTCAGCAA TGTGAAGGTG ATCCCGGACG GTTCGGGCGC GTTCACCGAA
AAGGTCGGCA TGTTGGTGCG CAAGGACAAT CTGGGCTTCG GCGCCCGCAG CTGGCGCTAT
GCCGCCATCG TCGACGATGG CCGCATCGAG GCCTGGTTCG AGGAACCCGG CCGCTGCGAC
GACTGCCCCG AGGATCCCTA TGGCGCCAGC TCGCCGGAAT CGGTCCTGGA CTGGCTGCGC
GCCAACCCCA CCAAGGCCGC GGCCTGA
|
|---|
| Protein sequence | MMKGRMMKQG DLLPEVTFQT RVRDESVGGP NPYRWQPVTT ADYFKGKRVV LFSLPGAFTP
TCSTYQLPGF EKAAGEMAEL GIDAIYCMSV NDSFVMNQWA KAQNLSNVKV IPDGSGAFTE
KVGMLVRKDN LGFGARSWRY AAIVDDGRIE AWFEEPGRCD DCPEDPYGAS SPESVLDWLR
ANPTKAAA
|
|---|
| |