Gene Pden_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1358 
Symbol 
ID4580609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1323995 
End bp1324810 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content69% 
IMG OID639768673 
Productmethyltransferase type 11 
Protein accessionYP_915155 
Protein GI119384099 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACT GTTCGGTCAA GGACGACATA CGCGACTATT GGAGCGTTCG GGCCAAGACC 
TATGACCGAA GCCCCGGCCA TGGACTGATG GCGCCGCGCG AGGCGGCCGC CTGGCGCACG
CTGATCCGGC GTCACCTCGG TCCCGGCGAG GGGCGACGAG CGCTGGATCT CGGCTGCGGC
ACCGGCGCCA TGTCGCGGCT GATGCAGAAG GCGGGCTTCG CCGTCACTGG GCTGGACTTC
GCCGGTTCCA TGCGGGACCG CGCGAGGGCG ACCAGCGCCC GCATCGCCTT CATCGCCGCC
GGTGCCGAGA ACACGGTGGA ACCCGACAGC CATTACGACG CGATCATCGC GCGCAACCTG
CTGTGGACCT TGCCCGACCC GGAAGCCGCG CTCGCCGACT GGTTTCGCAT CCTGAAGCGT
GGCGGGCGGC TTCTAGTCAT CGACGGCGAC CATGCCCGCC AAAGCCTGAT CGAGCGCGCC
CTTCCGTGGT TCGACCGCCT GCTCGGCAGG GTGCAGGACA GCCACAGCCC GGTGACCCCA
GCGCAATGGC GCGAACATTG GCGGATCATG GCGCAACTGC CCTTCGGCAC CGGCTTGCGT
GCCAGGGATG CCGCAAGCCT GCTATCGCGC GCGGGCTTCA CCGAGTTGCG GCACGAGAAC
CTGCGTGCGA TCCACAGCCG CCGCTGGCCA CTGTTTTCCC GCGCGCGCCT CGCTGCGCTC
GGCCAGCACC GCTTCGCTGT CTCGGCCAGC AAGCCGGGGT TAGAGGTGGT CGTGTCTTTC
GGCGAGCGGC GCGTCCGCGA AGAGCCAACG CGATAG
 
Protein sequence
MLNCSVKDDI RDYWSVRAKT YDRSPGHGLM APREAAAWRT LIRRHLGPGE GRRALDLGCG 
TGAMSRLMQK AGFAVTGLDF AGSMRDRARA TSARIAFIAA GAENTVEPDS HYDAIIARNL
LWTLPDPEAA LADWFRILKR GGRLLVIDGD HARQSLIERA LPWFDRLLGR VQDSHSPVTP
AQWREHWRIM AQLPFGTGLR ARDAASLLSR AGFTELRHEN LRAIHSRRWP LFSRARLAAL
GQHRFAVSAS KPGLEVVVSF GERRVREEPT R