Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1341 |
Symbol | |
ID | 4580595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1306419 |
End bp | 1307921 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639768660 |
Product | extracellular solute-binding protein |
Protein accession | YP_915142 |
Protein GI | 119384086 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTGCA AACTGCTCGC TTCCGCGGCT TTGGCCGCGG CCCTGTCTTC TGCTGCCTTG GCCAATGACG GCGTGCTGGA TGTCGTCGCC CCGTTCGAGA TCAAGGGCGC CGATCCGGTC ACTTCCGGCA ACATCTTCAT CAAGATGGAC GTGGCCGAGA CGCTGGTGAA CGTCGATGCG GCAGGCCGCC TGACGCCGGG GCTGGCGACT GCCTGGCGGG TCTCGGATGA CGGGCTGGAA TGGCGTTTCC ACCTGCGCGA GGGCGTGCGG TTCCATGATG GCAGTCCCTT TACCGCCGAG GCGGCCGCGA ATGCGCTGAA CATCGCGCGC GCCAAGCCGG GCCTGCTGGA GACCGCGCCG ATCACCGAAA TCGTCGGCGA GGGAGGCGAT CTGCTGGTGC GGCTTTCGGA ACCCTTCGCG CCGATGCCGG CCTTTCTCTC GGAATACCGC TCGCTGATCT ACGCGCCTGC GGCCTATGCG AAGGACGGCA GCGTGGCCGA GGTGATCGGG ACCGGCGCCT ATCGGGTCAC AAAGCTGGAA GCGCCGCTGC GGCTGGAGGC CGAGGCCTTT GCCGGCTATT GGGGCGACGC CCCCGCCATC GGCCGGGCGA CCTATCAGGC GGTGGGCCGG GCCGAGACGC GGGCGCTGCT GGCCGAAAGC GGCGATGCGG ACTATGTCTT CAACCTCGAC CCGGCCTCGA CCACCCGGCT GGCCTCGGTC GACAGCGTCG AGGTGCTGAC CGTATCGGTG CCCCGCACCC TGCTTTTGAA GGTCAATGCC GGTCATCCGG CGCTCTCGGA CCCGCGCGCG CGACAGGCGC TTGGGCTGGC CATCGACCGC GAGGGGCTGG CCGAGGCCGT GCTGCGCTTC CCGGCGGGCG GAACGCAGCT TTTCCCGCCC TCGCTGTCGG AATGGCATGA TGACGAACTG GAGCCGCTGA CCCATGACCC CGAAAAAGCG CGCGCGATGC TGGCCGAACT GGGCTGGGCG GCCGGGGCGG ATGGCATCCT GACCCGAGAC GGGCAGCGAT TCAGCCTGAC GCTGACCACC TTCCCCGACC GGCCGGAACT GCCGCTCTCG GCCGCCGTGC TGCAACAGAT GTTCGCCGAT ATCGGCGTGG AGATGATGAT CGATTCGACC AATTCCTCGG AGATTCCCGT GCGCCATGCG GATGGCACGC TGGATCTGGC GCTGTTCAAC CGCAATTTCG CGCTGGTCCC CGATCCGGTC GGCACGTTGC TGACCGACTA TGCACCGACC GGCGACTGGG GCGCGATGAA CTGGGACAAT GCCGAATTCA CCGGACTGGT CCGGGGACTG GCGCGGGGCG AAGGCGGGCA CGGTGAACGG GACCGCGCCA TCGCCATCCT GCAAGAGGAG CTGCCGGTGA TCCCCATCGC CTGGTATCAG CAGTTCGCGG CCGTCTCGAC GGGCATCACC GGCGCGGTGA TCGACCCCTA TGAGCGCAGC ATCGGGCTGA AGGAAATCCG GTGGGCGGAA TGA
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Protein sequence | MLCKLLASAA LAAALSSAAL ANDGVLDVVA PFEIKGADPV TSGNIFIKMD VAETLVNVDA AGRLTPGLAT AWRVSDDGLE WRFHLREGVR FHDGSPFTAE AAANALNIAR AKPGLLETAP ITEIVGEGGD LLVRLSEPFA PMPAFLSEYR SLIYAPAAYA KDGSVAEVIG TGAYRVTKLE APLRLEAEAF AGYWGDAPAI GRATYQAVGR AETRALLAES GDADYVFNLD PASTTRLASV DSVEVLTVSV PRTLLLKVNA GHPALSDPRA RQALGLAIDR EGLAEAVLRF PAGGTQLFPP SLSEWHDDEL EPLTHDPEKA RAMLAELGWA AGADGILTRD GQRFSLTLTT FPDRPELPLS AAVLQQMFAD IGVEMMIDST NSSEIPVRHA DGTLDLALFN RNFALVPDPV GTLLTDYAPT GDWGAMNWDN AEFTGLVRGL ARGEGGHGER DRAIAILQEE LPVIPIAWYQ QFAAVSTGIT GAVIDPYERS IGLKEIRWAE
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