| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1338 |
|---|
| Symbol | |
|---|
| ID | 4579441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1304019 |
|---|
| End bp | 1305242 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639768657 |
|---|
| Product | cobalamin synthesis protein, P47K |
|---|
| Protein accession | YP_915139 |
|---|
| Protein GI | 119384083 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTCA GCCAGCCAAC CCGCGACAAT CGCCTGCCCG TCACCGTCCT GTCCGGCTTC
CTCGGCGCCG GAAAGACCAC GCTGCTGAAC CATATCCTGA ACAATCGCGA GGGCCGCCGC
GTTGCGGTCA TCGTCAACGA CATGTCCGAG GTGAACATCG ACGCCGATCT GGTCCGCGAC
GGCGCCGAAC TGAACCGCGC CGAGGAAAAG CTGGTCGAGA TGACCAATGG CTGCATCTGC
TGCACCTTGC GCGACGACCT GCTGCAAGGG GTGCGCAAGC TGGCCGAGGA GGGCCGCTTC
GACTATCTGC TGATCGAGGG CACCGGCATC GCCGAGCCGT TGCCCGTCGC CGCGACCTTC
GATTTCCGCG ACGAGAACGG CGACAGCCTG TCGGATGTCT CGCGTCTCGA CACGATGGTC
ACGGTCGTCG ATGCGATCAA CCTGACGACG GATTTTGCCA GCGACGATTT CATCGCCGAA
CGCGGCGAGA GCCTGGGCGA CGAGGATGAG CGGACGCTGG TCAACCTGCT GACCGACCAG
ATCGAATTTG CCGATGTGGT GGTGCTGAAC AAGGCGACGG ATGCGGGACC CGAGAGGCTG
GACCGGGCGC GCAGGATCGT GCGGGCGCTG AACCCGGACG CGAAGCTGAT CGAGACGGAT
TTCGGCCGTG TCGATGCCGA TGCGATCTTC GATACCGGCC TGTTCGATTT CGACCGCGCG
CATATGCATC CGATGTGGGC GAAAGAGCTC TACGGGTTCC GGGATCATGT GCCCGAGACC
GAGGAATACG GCATCTCGTC CTTTGTCTAT CGGGCGCGGC GGCCGTTCCA TCCCCGCAAG
ATCTACGACC TCTTCAACGG CGAGTTGCCG GGCGTGATCC GGGCCAAGGG GCATTTCTGG
ATCGCCTCGC GCCCGAACTG GGCGGTGGAG TTCAGCCTGG CCGGCGTCGT TTCCTCGGTT
GTGCCGCTGG GCGGCTGGTG GGCCTCGGTG CCGCGGGAAC GCTGGCCGAC CCATCCCGAC
AGCCTCGCCG AGGTGGCGAA GCATTGGGAG GAACCCTGGG GCGACCGGCG TCAGGAACTG
GTGTTCATCG GCGCGGGCAT GGACCCTGCG GCCATCACCA AAGCTCTGGA CGACGCCCTG
GTCGACGCCT GGGACTTCAC GCCCGAGGCC TGGGCACGGT TGCCCGATCC CTTTCCGCAA
TGGGGGCAGC GTCGCGTCGC CTGA
|
|---|
| Protein sequence | MPLSQPTRDN RLPVTVLSGF LGAGKTTLLN HILNNREGRR VAVIVNDMSE VNIDADLVRD
GAELNRAEEK LVEMTNGCIC CTLRDDLLQG VRKLAEEGRF DYLLIEGTGI AEPLPVAATF
DFRDENGDSL SDVSRLDTMV TVVDAINLTT DFASDDFIAE RGESLGDEDE RTLVNLLTDQ
IEFADVVVLN KATDAGPERL DRARRIVRAL NPDAKLIETD FGRVDADAIF DTGLFDFDRA
HMHPMWAKEL YGFRDHVPET EEYGISSFVY RARRPFHPRK IYDLFNGELP GVIRAKGHFW
IASRPNWAVE FSLAGVVSSV VPLGGWWASV PRERWPTHPD SLAEVAKHWE EPWGDRRQEL
VFIGAGMDPA AITKALDDAL VDAWDFTPEA WARLPDPFPQ WGQRRVA
|
|---|
| |