| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1279 |
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| Symbol | |
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| ID | 4580318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1241012 |
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| End bp | 1241983 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639768597 |
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| Product | phage integrase family protein |
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| Protein accession | YP_915080 |
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| Protein GI | 119384024 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0644752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG GCCGCCTCGA CGACCGGGGC CGGATCTCGG CCTTTCTCGA CGCGCAGGCA
GCCGAGGCGG GGGCGGCGCG CAACACGCTT CTGGCCTATG GCCGCGACCT GCGGGATTTC
GTGGACTGGC TGGCCGCCCG GGACGAAACG CTGCTGACCG TCCCGCGCGA GGGGGTCGAG
GACTACCTGT CCCATTGCGA TGCCCAGGGC CTGTCGCGGG CGACGCGGGC GCGGCGGCTG
TCCGCGATCC GGCAACTGAC CCGCTTCGCG CTGGACGAGG GCTGGCGCGA GGACGACCCC
GCCGGCCGCA TCAGCGGGCC GGGGCGTGCG CAGCGCCTGC CCAAGGTCCT GGACCGCGCC
GAGGTGCAGG CCATGCTGGA CGCCCTGCCC CGCATCGGCC GCAACGAAAC CGAGCGCGCC
CGCAACCTGG TGCTGGTCGA ACTGGTCTAT GCCACCGGCA TGCGGGTCAG CGAGCTGGTC
TCGCTGCCGG TCGGGGCCTG CCGCGGCGAT CCGGCGCTGC TGCTCATCCG CGGCAAGGGC
GGCAAGGAAC GCATGGTGCC ACTCAGCGAC CCCGCCCGCC GGGCACTGGC CGCCTGGCTG
AAGCGGCGCG ACGACGCGCC GGCGGAAAGC CCGCTGGGCC GGCTAGTCGC CGGCAAGGGC
GCACGCTGGC TGTTTCCCGC CCCCAGCCGC GAAGGGCACA TGACCCGGCA GGCGATGAAC
GCGCTGCTGG GGCAATTGGC GCTGGCGGCG GGGATCGACC CCGCCCGCGT CTCGCCCCAC
GTCATCCGCC ACGCCTTTGC CACGCATCTG CTGGAAGGCG GCGCCGATCT GCGCGCCATC
CAGACGCTCT TGGGCCATGC CGATCTGGGC ACGACCGAGA TCTATACCCA TGTCATGGAC
ACGCGGATGC GCGATCTGGT GCTGAACCAC CATCCGCTGG CCAAGGGCCG CGGGGACGAG
AACGAGCAAT GA
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| Protein sequence | MSRGRLDDRG RISAFLDAQA AEAGAARNTL LAYGRDLRDF VDWLAARDET LLTVPREGVE
DYLSHCDAQG LSRATRARRL SAIRQLTRFA LDEGWREDDP AGRISGPGRA QRLPKVLDRA
EVQAMLDALP RIGRNETERA RNLVLVELVY ATGMRVSELV SLPVGACRGD PALLLIRGKG
GKERMVPLSD PARRALAAWL KRRDDAPAES PLGRLVAGKG ARWLFPAPSR EGHMTRQAMN
ALLGQLALAA GIDPARVSPH VIRHAFATHL LEGGADLRAI QTLLGHADLG TTEIYTHVMD
TRMRDLVLNH HPLAKGRGDE NEQ
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