Gene Pden_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1247 
Symbol 
ID4580013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1209295 
End bp1210518 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content68% 
IMG OID639768565 
Productglutathionylspermidine synthase 
Protein accessionYP_915048 
Protein GI119383992 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0754] Glutathionylspermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.37102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAC GCACCCTTCC CGAGCGGCCC GGCTGGCGCG ACAAGGCCGA GGAACTGGGC 
TTCACCTTCG CCGACATGGG CGGCGAGCCC TATTGGGACG AGACCAGCGC CTATCGCTTC
ACCCTGCGCG AGATCGAGGA GGATATCGAA GCCCCCGCCA CCGAACTGCA TGCGCTGTGC
CGCGAGGCGG TGGACCGCGC CGTGCGCGAC GAGGCCTGGC TGACCCGGCT CGACATCCCC
CGCCAGCACT GGGACCTGAT CGCCGCCAGC TGGTCACGGG GCGAGCCCGA GCTTTATGGC
CGCATGGACC TGGCCTATGA CGGCAACGGG CCGGCCAGGC TGCTGGAATA CAATGCCGAC
ACGCCGACCT CGCTTTACGA ATCCGCCAGC TTCCAGTGGC TCTGGTTCGA ACAGCAGCAG
GCTGCGGGCG TGCTCGACGC CGATGCCGAC CAGTTCAACA GCATCCACGA GGCGATCGTG
GCGCGCTGGA CGCAGATTTG CCCCGACGGC GAAGAGGTGC ATTTCGCCGC CGATCCCGAC
AACCCCGAGG ATTACGCCAC CGTCGAGACC CTGGCCTGGG CGGCGCGCGA GGCGGGCCTG
GGCGCGCATT TCACCGCGCT TTCCCAGATC GGCCTGACCG AAGAGGGCCA GTTCGCCGAC
GACCAGTCCC GCGTCATCGG CACGCTCTTC AAGCTCTATC CGTGGGAGGA CATGCTGCGC
GACGAGTTCG CCGCGCATCT GCAAAGCTCC GGCACCCGCT TCATCGAGCC GCCCTGGAAG
GCGGTCCTGT CGAACAAGGG CATCCTGCCG CTCTTGTGGC AGATGTTCCC CGGCCACCCG
AACCTGCTGC CCGCCTTCTT CCTTGCGGAT GTGCAGGATG CGCTGACCGG CGGCAATCCC
GCCCCCGAGG CGGCTCAGGC TTTCGAGGCG GCGCGGGAAA CACTGGCGCT GGGTCACGTC
ACCAAGCCTA TCTTCTCGCG CGAAGGCGCA GGGGTGGTGA TCCACGAAGG CGGCCGCGAG
GCGGCGCGCA CCGGCGACGA CAGCTATTCG CACCATCCGA TGATCGTGCA GGGCCTTGCC
CGGCTGCCGG ATTTCGGCGG CTTCCGCCCG GTGCTCGGCG CCTGGATCGT CGGCGAGAAC
TGCTGCGGCC TCGGCCTGCG CGAGGACCGC TCGCCCATCA CCCACAACCT GTCGCGGTTC
AAGCCGCATT TCATCGAGGG CTGA
 
Protein sequence
MEKRTLPERP GWRDKAEELG FTFADMGGEP YWDETSAYRF TLREIEEDIE APATELHALC 
REAVDRAVRD EAWLTRLDIP RQHWDLIAAS WSRGEPELYG RMDLAYDGNG PARLLEYNAD
TPTSLYESAS FQWLWFEQQQ AAGVLDADAD QFNSIHEAIV ARWTQICPDG EEVHFAADPD
NPEDYATVET LAWAAREAGL GAHFTALSQI GLTEEGQFAD DQSRVIGTLF KLYPWEDMLR
DEFAAHLQSS GTRFIEPPWK AVLSNKGILP LLWQMFPGHP NLLPAFFLAD VQDALTGGNP
APEAAQAFEA ARETLALGHV TKPIFSREGA GVVIHEGGRE AARTGDDSYS HHPMIVQGLA
RLPDFGGFRP VLGAWIVGEN CCGLGLREDR SPITHNLSRF KPHFIEG