Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1240 |
Symbol | |
ID | 4581094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1202142 |
End bp | 1203749 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639768558 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_915041 |
Protein GI | 119383985 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.770213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGTTG CGGCCGCTCT GGCGGCCATG CCGCGCGTCG CGGCGGCGCA GGCGCTGGAC GTGGTGCCGG TCGCGGCGCT TCCTGCGCCC AGGCTAAGCT TTTCCGAGCA GGAAATGCAA CTGGCCCAGC AGGTTGCCGA CCATCCGGGC CTGGCCGATT TCTATGGCAC GAACGGGCTG AAGCCGGTCT TTACCGGCGC CGCGGGGGCC GCGCGCCGCG CTGCGCTGAT CGAGGCGCTG GGGCAGGCGG CCTCGCACGG GTTGCCGCCC ACGCGTTATC GCCAGGCGGC GTTGCGCACC CTCGACCGCG AGGGCGCCGA CACGGTCGAG GAAGAGATCC GCTTTGCCCG CGCCTTCGCC GACTGGAGCC GCGACGTGTC GGGCGGGATC CTCGATCCGC GCCGGGTCGA ACCCGGCATC AAGCGCGAGG TGCAGCGCCC GCGGACCGGC GATCTGCTGC GCGCCTTTGC CGCCGCCGCC GATCCGGTCG CCATGCTCGC TGCGCTGCCG CCGCAGGATG CGCGCTATGA GGCGCTGCGC CAGGCGCTGG CGCGGCAGTC GCAACTGGTC GCGCCCGGCG ATGCGCCGCG GGTGGCCGAG GGGCTGTGGC GCGAGGGGAC CAGCGACCCG GCGGTCGCGG CGCTGCGCGT GCGCCTTGCC TCGGTCGGTT TCGCCGCGGC GCCCATGGGC AGCCCGCTGA CCTATGACGG GGCGCTGGCG CAGGCGGTCG CCGCCTATCA GAAGGCGGCG GGCCTGCCGG CGGACGGGGT GGCCGGGCCG CGCACGGTGG CGCGGCTGAA CCGCGGCACC GGCCCCGAGG CCGAGGCGAT CCTGGTTGCG CTGGAGCGGA TGCGCTGGAT GCGCGGGCAC GACCTGAACG CCCGCCATGT CTGGGTGAAC CTGCCCGAGT TCAACGCCCG CATCTACGAG AACGGCCGAG AGGTCTTCGA GACCCGCGTG GTCATCGGCA AGGCCAATCG CGAATTCGAG ACGCCCGAGT TCAGCGAGAC GATGAAATAC ATGGTCGTCA ACCCGCGCTG GAACGTGCCG CGCTCGATCA CCGTCAAGGA ATACCTGCCG CGGCTTCAGG CCAACCGGCA TGCGGTCGGG CATCTCGACG TGGTGGACGG GGCCGGCAAT GTCATTGCGC GCGACCGCAT CGACTTTCGC AAATACAGCG CCAAGACCTT TCCCTATCGC ATGCGGCAGA AACCCAGCGA CGACAATGCG TTGGGGCAGG TCAAGTTCAT GTTCCCGAAC CCGTGGAACA TCTATCTGCA CGACACGCCG ACCAAGCATC TGTTCAACCA GTCCAGCCGC GCCTATTCGC ATGGCTGCAT CCGCGTCGGC CGCCCGGTCG ACCTGGCGCA TGAGCTGCTG AAGGGCCAGG TGGAAAGCCC CGAGGCGGTT TTCTCCAAGG CGCTGAAATC CGGGCGCGAG ACCTATCTGA ACCTGCGCCC GCCCGTGCCG GTGCATCTGG TCTATTTCAC CGCCTTCCCC GACGAGAGCG GCCAGATCCG CCGTTTTCCC GACATCTATG GCCGCGATGC GCTGGTGCAC GCGGCGCTGG TCAAGGCCGG GCTGGATTCC GCGGCCGCGG ATGAATAG
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Protein sequence | MVVAAALAAM PRVAAAQALD VVPVAALPAP RLSFSEQEMQ LAQQVADHPG LADFYGTNGL KPVFTGAAGA ARRAALIEAL GQAASHGLPP TRYRQAALRT LDREGADTVE EEIRFARAFA DWSRDVSGGI LDPRRVEPGI KREVQRPRTG DLLRAFAAAA DPVAMLAALP PQDARYEALR QALARQSQLV APGDAPRVAE GLWREGTSDP AVAALRVRLA SVGFAAAPMG SPLTYDGALA QAVAAYQKAA GLPADGVAGP RTVARLNRGT GPEAEAILVA LERMRWMRGH DLNARHVWVN LPEFNARIYE NGREVFETRV VIGKANREFE TPEFSETMKY MVVNPRWNVP RSITVKEYLP RLQANRHAVG HLDVVDGAGN VIARDRIDFR KYSAKTFPYR MRQKPSDDNA LGQVKFMFPN PWNIYLHDTP TKHLFNQSSR AYSHGCIRVG RPVDLAHELL KGQVESPEAV FSKALKSGRE TYLNLRPPVP VHLVYFTAFP DESGQIRRFP DIYGRDALVH AALVKAGLDS AAADE
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