| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1234 |
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| Symbol | |
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| ID | 4581088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1197226 |
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| End bp | 1198965 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639768552 |
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| Product | capsule polysaccharide export protein-like |
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| Protein accession | YP_915035 |
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| Protein GI | 119383979 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0195673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.85548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAC CGCCTAAGGC GCGCGCCTAT CGCATCAGCC GCGAAGAGTC GGTGCTGGCA
GCCAGCGAGG GCCCGCACGC AGCCGGCACG GCGCAAAAAG TGCAGGTCGA GGTCCAGAAG
CGCATCGAAT CCGCGCGCGC CGGCCAGAAC CCCGAGCAGC TTTTCTCGAC CGAGGAGGAC
GGTTTCGGCG ACATGCGCTT TCCCGGCGCG GCGAAGAAGC CTGCCGAGGC CGCGCAGGGC
AAGCCGCCGA TGGCCGAACG CATCGCCGCG GTGCGGGCCG AGAACCTGAC CGACCGCCAG
TTGCGCATGG CGCGCCGCAT CGCCGCCATG CACGAGATCA AGGCCGCTTC CGATCATGAG
GCGGTGGTCC TGCTGCGCGA CCGCGGCATC GACCCGTTCC ACCGCGCCGC GGTCGGCAAG
ATCCTGGCGG AAGAGGGCGC GCGCGCCCAG GCTGCGGCAT CCGCCAACGG CGCCAACATG
CCGGTGCCGA CGCGCCGTGA CGGCCCGCCC CCCCGCAGTC GCGGCACCGA GATCATGCCC
CTGTCGCCCG GCACCACCAG CCTGCCCTCG CGCGAGGCGC TGACCGAGGA TCGCCGCGCC
GCCGAGATCA TCCGCATCCA GCAGGACATC GCCCGCCGTC GCCGCCGCAG GCTGTTGATG
CTGCTTGCAC GCCTTGCGGC CTTCGTCGTG CTGCCGACGC TGATCGCGGG CTGGTATTAT
TCCTCGGTGG CCACGCCGCT TTACGCCACC GTCTCGCAGT TCCAGATCCA GCAGGCCGAG
CAATCCAGCC CGGGCGGCCT GGGCGGGCTG TTCGGTGGAA CGCAGTTGGC CACCAATACC
GACTCGGTCT CGGTGCAAAG CTATCTGACC TCGCGCGACG CGATGCTGCG GCTCGACAAG
GATCTGGGCT TCAAGCGCGC CTTCCAGGAG CCGGCCATGG ACCCGATCCT GCGCCTGCCG
CCTGATGCGA CGAACGAACA GGCCTACAAG CTCTATCGCA ACTCGGTGAA GATCGGCTAT
GATCCGACCG AGGGCGTGAT CAACATGGAA GTGATCGCCC CCGACCCCGA GCTCAGCCAG
GAATTCTCGC TGGCGCTGAT CAAATATGCC GAGGGCCAGG TGGACCAGAT GACCGCGCGC
CTGCGCGAGG ACCAGATGAA GGGTGCGGTC GAGAGCTATC AGGATGCCGA GAGAAAGGTG
CTGCTGGCTC AGCGCCGGGT GCAGGAATTG CAGCAGAAGC TGGGCGTTCT CGACCCGGCG
GCCGAAGGCA GCGTCATCAT GGGCCATATC GCCGAGCTCG AGCGCCAGCT GGCGGAAAAG
AAGCTGGAAC TGGGCCAGTT GAAATCGAAC CTTCGCCCTA ATGCCAGCCG CGTCGCCGGC
GTCGAGGGCG ATATCGGCCG GCTCGAGGAG ATGCTGGCCC AGACCCGCAG CCAGCTGACC
GAGGGCAACA ACGCCCGCGG CTCGCTGGCC ACCATCTCGG GCGAGATCCG CATCGCCGAA
TCCGACCTCA TGACCCGGCA GGAACTGCTG GCCACAGCCG CCGCGCAGAT GGAGACCGCG
CGGATCGAGG CCAACAAGCA GGTCCGCTAT CTCTCGCTCT CGGTCGCGCC GGTGCCCCCG
GACGAAGCGA CCTATCCCAA GGCTTTCCAG AACACGATCG TGGCCTTCCT GGTGTTTTCG
GGCATCTACC TGATGCTCTC GCTGACGGCC TCGATCCTGC GCGAACAGGT ATCTTCATGA
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| Protein sequence | MTTPPKARAY RISREESVLA ASEGPHAAGT AQKVQVEVQK RIESARAGQN PEQLFSTEED
GFGDMRFPGA AKKPAEAAQG KPPMAERIAA VRAENLTDRQ LRMARRIAAM HEIKAASDHE
AVVLLRDRGI DPFHRAAVGK ILAEEGARAQ AAASANGANM PVPTRRDGPP PRSRGTEIMP
LSPGTTSLPS REALTEDRRA AEIIRIQQDI ARRRRRRLLM LLARLAAFVV LPTLIAGWYY
SSVATPLYAT VSQFQIQQAE QSSPGGLGGL FGGTQLATNT DSVSVQSYLT SRDAMLRLDK
DLGFKRAFQE PAMDPILRLP PDATNEQAYK LYRNSVKIGY DPTEGVINME VIAPDPELSQ
EFSLALIKYA EGQVDQMTAR LREDQMKGAV ESYQDAERKV LLAQRRVQEL QQKLGVLDPA
AEGSVIMGHI AELERQLAEK KLELGQLKSN LRPNASRVAG VEGDIGRLEE MLAQTRSQLT
EGNNARGSLA TISGEIRIAE SDLMTRQELL ATAAAQMETA RIEANKQVRY LSLSVAPVPP
DEATYPKAFQ NTIVAFLVFS GIYLMLSLTA SILREQVSS
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