Gene Pden_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1206 
Symbol 
ID4578588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1179283 
End bp1179930 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content72% 
IMG OID639768523 
Producturease accessory protein UreF 
Protein accessionYP_915007 
Protein GI119383951 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA TCACGCCTGA AGCCGCCCGG CTGAGATTGG CGCAATACCT GTCGCCCGCC 
TTTCCGACCG GAGGCTTCGC CTGGTCGCAG GGGCTGGAAT GGGCGATGGA CCAAGGCGCG
GTGACGCGTG CCACCCTGCC GCAATGGCTG GAGGACTGGC TGGACCACGG CGCGGGCTGG
TGCGATGCGG TGCTGTTGTC GCTGGCGCTG CGCCGGGGCG CCGATCACGC CGAGTTGGAC
GACCTGGCGC GGGCCATGTG TCCCTGCGCC CGGCGCCTGG CCGAGACAGT CGAGCAGGGC
ACCGCCTTCG CCGCCAATGT CGCGGCACTG ACCGGCCGGC CGCAGTCCGC AGCCGCCCTG
CCGGTGGCGG TAGGCCGGGC CTGCGGCTGC CTTCCCCTGC CCGCGGGCGA GATCATCGGC
CTTTACCTTC AGGCGCAGGC GGCAGCGCTG ATCTCGGCGG CGGTGCGGTT CCTGCCGCTC
GGGCCGGTCG AGGGTCAGGC GATGCTGGCC GGATTGCAGC CTGCGCTTCT GGCGGCGGCG
GCGCGGGCCG GAACGGCCGA CCCCAAGGAT CTGGCCAGCG CCACATGGGG CGCGGACCTC
GCCGCGATGC GGCACGAAAC CATGGTGACA AGGATTTTTC GATCATGA
 
Protein sequence
MTTITPEAAR LRLAQYLSPA FPTGGFAWSQ GLEWAMDQGA VTRATLPQWL EDWLDHGAGW 
CDAVLLSLAL RRGADHAELD DLARAMCPCA RRLAETVEQG TAFAANVAAL TGRPQSAAAL
PVAVGRACGC LPLPAGEIIG LYLQAQAAAL ISAAVRFLPL GPVEGQAMLA GLQPALLAAA
ARAGTADPKD LASATWGADL AAMRHETMVT RIFRS