Gene Pden_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1205 
Symbol 
ID4578587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1178651 
End bp1179286 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content70% 
IMG OID639768522 
Producturease accessory protein UreG 
Protein accessionYP_915006 
Protein GI119383950 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG GACCCCTGCG CGTCGGCATC GGCGGCCCGG TCGGCGCGGG CAAGACGACG 
CTGACCGAAC AGATCGCCCG CGCGCTGGCG CCGCGCCTGT CGATGGCGGT GATCACCAAC
GACATCTACA CGCGCGAGGA CGCCGAGGCG CTGATGCGCG CGCAGGTGCT GCCCTCGGAA
CGCATTCGCG GCGTCGAGAC CGGCGGCTGC CCCCATACCG CCATCCGCGA GGATGCCAGC
ATCAACCTTG CCGCCATCGC CGAGCTGAAC GCGGCCTTTC CCGACCTGGA CCTGGTTCTG
ATCGAATCCG GCGGCGACAA CCTGGCCGCG ACCTTCTCGC CCGAACTTGC CGATCTGACG
ATCTATGTCA TCGACACGGC GGCGGGACAG GACATTCCGC GCAAGCGCGG CCCCGGCCTT
GCGCGTTCGG ACCTGCTGGT CGTCAACAAG ACCGACCTTG CGCCGCATGT CGGCGTGGAT
GCCGCGCTGC TCGAGGCCGA TGCCCGGGCC TCGCGCGCAG GCCGCCCGGT GGTCATGGCC
GCGCTGCGCC ACGGCAAGGG CGTGGCCGAG GTGGTCGATT TCCTGATCGA ACAGGGCGGG
TTGCAGCCCT GCCCTGCGCA TTCGCACGGG CAATAG
 
Protein sequence
MSNGPLRVGI GGPVGAGKTT LTEQIARALA PRLSMAVITN DIYTREDAEA LMRAQVLPSE 
RIRGVETGGC PHTAIREDAS INLAAIAELN AAFPDLDLVL IESGGDNLAA TFSPELADLT
IYVIDTAAGQ DIPRKRGPGL ARSDLLVVNK TDLAPHVGVD AALLEADARA SRAGRPVVMA
ALRHGKGVAE VVDFLIEQGG LQPCPAHSHG Q