Gene Pden_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1182 
Symbol 
ID4579947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1153562 
End bp1154359 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content66% 
IMG OID639768498 
Product3-oxoadipate enol-lactonase 
Protein accessionYP_914983 
Protein GI119383927 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTATC TGGACCTGCC CACCCACCGG CTTTACTACC GCATCGACGG CGGGACAGGG 
GAAAAGCCGT GGCTGACCTT CTGCAATTCC CTGGGCACCG ACCTGTCCAT GTGGGATACC
CAGGTTGCGG CTCTTTCGGA CAGCTTCCAA ATTCTGCGCT ATGATCGCCG CGGCCATGGC
AGGTCCGAGG CCCCGACGCC GCCTTACCGC CTGGCCGATC TGGGCGGCGA CGTGATCGCG
CTGCTGGATG CGCTGTCCAT CGAGCGCACG CATTTCTGCG GCCTGTCCAT CGGCGGGCTG
ACCGGGCAAT GGCTTGCCAT CCATGCCGGG GCGCGGTTCG ACCGCATCGC CCTTTGCGCC
ACTGCCGCCC GGATCGGGAG CGCGGAAAGC TGGAGCGCCC GCATCGACGA GGTCAAGGCG
AACGGCCTGG GCAGTCTGGT GCCCGGAACC GCGGAGCGCT GGTTCACGCC GGCCTTTCGC
GCCGCCCGGC CCGATGCCGT GGACGCGATC CTGGCCAGCT TTGCCGCAAC CTCGGTCGAT
GGCTATGTCG GATGCTGCGC GGCGCTTGCA GAAGCGGATC TGCGGGATCG GCTTGGTCAG
GTCGCGAACC CGTTGCTGGC GGTTTCCGGC AATGACGATC CGGTTTGCCG GCCCGCCCAT
CTGAAAGCCA TCGCGGAGGG CGTGCAAGAC GGACGTCATG CATGCCTGCC GGGGCGGCAT
ATCGTGAACC TGGAATCGGC GTCGCTGTTC AATACCGTTC TGAGGGATTT CCTGACCGCT
GCGCCTCCTT GCGCCTGA
 
Protein sequence
MPYLDLPTHR LYYRIDGGTG EKPWLTFCNS LGTDLSMWDT QVAALSDSFQ ILRYDRRGHG 
RSEAPTPPYR LADLGGDVIA LLDALSIERT HFCGLSIGGL TGQWLAIHAG ARFDRIALCA
TAARIGSAES WSARIDEVKA NGLGSLVPGT AERWFTPAFR AARPDAVDAI LASFAATSVD
GYVGCCAALA EADLRDRLGQ VANPLLAVSG NDDPVCRPAH LKAIAEGVQD GRHACLPGRH
IVNLESASLF NTVLRDFLTA APPCA