Gene Pden_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1062 
Symbol 
ID4578642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1039892 
End bp1040434 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID639768382 
Productflavin reductase domain-containing protein 
Protein accessionYP_914867 
Protein GI119383811 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAAC TGCCGCTGAG TCGCGCCTTC ACCCTGATCG AGCCGGGACC GGTCACCTTG 
GTCACCACCC ATGACGGTGC AAGGGACAAC GTGATGACCA TCACCTGGAC CATGGTGATG
GATTTCACGC CCCGTTTCGC CATTACCACC GGGCCATGGA ACCATTCCTG GACCGCGCTC
AGCGAGACCG GGGAATGCGT GATCGCCATC CCGACACTGG ACATGATCGA CACGGTGATC
GGCATCGGAA CCTGCTCGGG CGCCGAGGTG GACAAGTTCC AGCGGTTCGG TCTGGCGCGT
CTGCCCGCAA CGCATGTCCG CGCACCGCTG ATCCGCGACT GCCTCGCCAA TATCGAATGC
CGCGTGGTCG ATATCGTCGA ACGTCATGGC ATCGTCGTTC TGGACGGAGT GGCGGCCTGG
TTCGACGGCA ACCGCACGGA GACGCGGACC CTGCATGCGG TGGGCGACGG CACCTTCGTC
ATCGACGGAG ACAGGCTCGA CCGAAGAGAG GCGATGCGAT CGAAGCTGCC CGATGGGATA
TAG
 
Protein sequence
MKELPLSRAF TLIEPGPVTL VTTHDGARDN VMTITWTMVM DFTPRFAITT GPWNHSWTAL 
SETGECVIAI PTLDMIDTVI GIGTCSGAEV DKFQRFGLAR LPATHVRAPL IRDCLANIEC
RVVDIVERHG IVVLDGVAAW FDGNRTETRT LHAVGDGTFV IDGDRLDRRE AMRSKLPDGI