Gene Pden_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1028 
Symbol 
ID4579583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1006618 
End bp1007340 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID639768350 
ProductABC transporter related 
Protein accessionYP_914835 
Protein GI119383779 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TCAAACAGGT GCGCAAGAGC TATGGCTCGC TGGAGGTTCT GAAAGGGATC 
GACCTGACCA TCGACAAAGG CGAGGTCGTG GCCATGATCG GGCCTTCGGG CTCGGGCAAG
TCCACCCTGC TGCAATGCAT CAACGGCCTG GAAACCATTT CCTCGGGCGA GATCATCGTG
GATGGCATCA GCGTCTTTGA CAAGGCGACG AACCTGAACC ATCTGCGCCG CAAGCTGGGC
ATCGTCTTCC AAAGCTACAA TGCCTTCCCG CACATGACCG TGCGCCGGAA CGTAACGCTG
GCTCTGACCA AGGTGTTGGG CGTGTCTCGC GACCAGGCCA ATGCCATCGC CGAGACACAA
TTGCAGCGGG TCGGTCTTCT GGCCAAGGCC GATGTCTATC CGACCGCGCT GTCGGGCGGA
CAGCAGCAGC GTCTGGGTAT TGCCCGCGCG CTTGCCATGG GCCCGTCATA TATGTTGTTC
GACGAGGTGA CTTCGGCGCT TGATCCCGAA CTGGTGGCCG AGGTTCTGGC AACGCTCCGC
CAGCTTTCCG CTGAGGGGAT GACGATGATT CTGGTGACGC ATGAGATGCA ATTCGCCCGC
GAGGTCGCCG ATCGGGTGGT CTTTTTCCAT GAAGGAGTGA TCGCTGAATC CGGCCCGCCC
CAGCAGATAT TCGGCAACCC CAAGTCCGAA AGGCTGCGGG CCTTTGTTTC TCGCGCGGGC
TGA
 
Protein sequence
MIEIKQVRKS YGSLEVLKGI DLTIDKGEVV AMIGPSGSGK STLLQCINGL ETISSGEIIV 
DGISVFDKAT NLNHLRRKLG IVFQSYNAFP HMTVRRNVTL ALTKVLGVSR DQANAIAETQ
LQRVGLLAKA DVYPTALSGG QQQRLGIARA LAMGPSYMLF DEVTSALDPE LVAEVLATLR
QLSAEGMTMI LVTHEMQFAR EVADRVVFFH EGVIAESGPP QQIFGNPKSE RLRAFVSRAG