Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1028 |
Symbol | |
ID | 4579583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1006618 |
End bp | 1007340 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639768350 |
Product | ABC transporter related |
Protein accession | YP_914835 |
Protein GI | 119383779 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA TCAAACAGGT GCGCAAGAGC TATGGCTCGC TGGAGGTTCT GAAAGGGATC GACCTGACCA TCGACAAAGG CGAGGTCGTG GCCATGATCG GGCCTTCGGG CTCGGGCAAG TCCACCCTGC TGCAATGCAT CAACGGCCTG GAAACCATTT CCTCGGGCGA GATCATCGTG GATGGCATCA GCGTCTTTGA CAAGGCGACG AACCTGAACC ATCTGCGCCG CAAGCTGGGC ATCGTCTTCC AAAGCTACAA TGCCTTCCCG CACATGACCG TGCGCCGGAA CGTAACGCTG GCTCTGACCA AGGTGTTGGG CGTGTCTCGC GACCAGGCCA ATGCCATCGC CGAGACACAA TTGCAGCGGG TCGGTCTTCT GGCCAAGGCC GATGTCTATC CGACCGCGCT GTCGGGCGGA CAGCAGCAGC GTCTGGGTAT TGCCCGCGCG CTTGCCATGG GCCCGTCATA TATGTTGTTC GACGAGGTGA CTTCGGCGCT TGATCCCGAA CTGGTGGCCG AGGTTCTGGC AACGCTCCGC CAGCTTTCCG CTGAGGGGAT GACGATGATT CTGGTGACGC ATGAGATGCA ATTCGCCCGC GAGGTCGCCG ATCGGGTGGT CTTTTTCCAT GAAGGAGTGA TCGCTGAATC CGGCCCGCCC CAGCAGATAT TCGGCAACCC CAAGTCCGAA AGGCTGCGGG CCTTTGTTTC TCGCGCGGGC TGA
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Protein sequence | MIEIKQVRKS YGSLEVLKGI DLTIDKGEVV AMIGPSGSGK STLLQCINGL ETISSGEIIV DGISVFDKAT NLNHLRRKLG IVFQSYNAFP HMTVRRNVTL ALTKVLGVSR DQANAIAETQ LQRVGLLAKA DVYPTALSGG QQQRLGIARA LAMGPSYMLF DEVTSALDPE LVAEVLATLR QLSAEGMTMI LVTHEMQFAR EVADRVVFFH EGVIAESGPP QQIFGNPKSE RLRAFVSRAG
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