Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1012 |
Symbol | |
ID | 4579761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 990373 |
End bp | 991899 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639768334 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_914819 |
Protein GI | 119383763 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGCTTG ACCCGCATCA CTCGCCGCAA GGCACCGTCC GCGACTGGCT CGACATCCGC GCCACCGAAC GGGGCGACGC CACCAGCCAC ATCTTCCCCG GCGACGGCGG CGCGCTGACC TGGCGCGAGC TGCAGGGTGA GGCCGCCCGC ATCGCCGGGC ACCTGGCCGG GCTGGGACTG TCCTGCGGCG ACAGCGTGGC GCTGATGTTG CCCAATGGCC GCAATGCGGT GCTGGGCCTG TTCGGCGCGC TATACGGGGG TTTCCGCGCC ACGATGATCA ACCTGGTCGC CGGAGCCGAG GCCGTCGGCT ATGCGCTGTC GCATTCCGGC GCCCGGGCGC TGCTGCTGGA TCCCGGCCAG CGCGGGCTGC TCGACAGCGC GCTGGCCGCC CATCCCGCCG AACCCATGGT CATCGAGGCC GGGGTGGGCT TCCGCTGGCC CGCCGGCTGC GAACCGGCGG CGCCGCATCC GCATGGCGCC GAGGATGACG CGCTGCTGAT GTACACCTCG GGCACCACCG GCCGGCCCAA GGGGGTAGTG CACAGCCATG CCAGCCTGCT GGCCGGCGGC TGGACCACGG CGCTGGCGCA TGAGTTGCAG CCCGAGGATC GGGCGCTCTG CGTGCTGCCG ATCTATCACA TCAACGGGCT TTGCGTGACC ATCCTGGCGC CGCTGCTCTC GGGCGGCTCG GTGGTGGTCT GCGAGCGATT CTCGGCCAGC CAGTTCTGGG GCCTCTGCGA ACGGCACGGG GCAAGCTGGT TCTCTGTCGT GCCGACGATC ATCTCGCATC TGTTGCATGG CGAGGGCGAG CCGTCGCCCC AGGCCCGGGC ACGGCTGCGC TTCGGCCGCT CGGCCTCGGC GGCGCTGGCG CCCGAGGTGC AGTCGGGTTT CGAGGGCCGC TTCGGCATTC CCATCGTCGA GACCATGGGC CTGACCGAGA CGGCGGCGCA GATCCTGTCG AACCCGCTGC CGCCGGGCCT GCGCAAGATC GGCTCGCCCG GCCGGGCGGT GGGCAACCAG GTGGCAATCC TGTCGCCCGA CCTGCGCCCG CTGCCGCCGG GCGCCGAGGG CGAGATCGCC GTGCGCGGGC CCAATGTCAT GCGCGGCTAT CTGGGCGACC CGGTCGCGAC CGCCGCCGCG CTGACCGCGG ACGGCTGGCT GCGCTCCGGC GATTTGGGCC GGATGGACGA GGAAGGCTAT GTCTTCGTCA CCGGCCGCCT GAAGGAGCTG ATCATCAAGG GCGGCGAGAA CATCGCCCCG CGCGAGATCG ACGAGGCGCT CTATACCCAT CCCGACGTGA TCGAGGCCGC GGCCTTCGCC CGCAAATGCG CCCGCTACGG CGAGCGGGTC GAGGCGGCCG TCACCCTGCG CCCCGGCTCG GCGCTGCAGC CGCCCGAACT GATCTCGATC TGCGAGGAGC GGCTGGGGGC GTTCAAGTCA CCCGAGGTGA TCCACCTGAT GGCCGAGCTG CCCAAGGGCC CCTCGGGCAA GATCCAGCGC CTGAAGCTGG CGCAGCTGAC GCAATAG
|
Protein sequence | MRLDPHHSPQ GTVRDWLDIR ATERGDATSH IFPGDGGALT WRELQGEAAR IAGHLAGLGL SCGDSVALML PNGRNAVLGL FGALYGGFRA TMINLVAGAE AVGYALSHSG ARALLLDPGQ RGLLDSALAA HPAEPMVIEA GVGFRWPAGC EPAAPHPHGA EDDALLMYTS GTTGRPKGVV HSHASLLAGG WTTALAHELQ PEDRALCVLP IYHINGLCVT ILAPLLSGGS VVVCERFSAS QFWGLCERHG ASWFSVVPTI ISHLLHGEGE PSPQARARLR FGRSASAALA PEVQSGFEGR FGIPIVETMG LTETAAQILS NPLPPGLRKI GSPGRAVGNQ VAILSPDLRP LPPGAEGEIA VRGPNVMRGY LGDPVATAAA LTADGWLRSG DLGRMDEEGY VFVTGRLKEL IIKGGENIAP REIDEALYTH PDVIEAAAFA RKCARYGERV EAAVTLRPGS ALQPPELISI CEERLGAFKS PEVIHLMAEL PKGPSGKIQR LKLAQLTQ
|
| |