Gene Pden_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0952 
Symbol 
ID4579663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp937769 
End bp938428 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID639768273 
ProductDSBA oxidoreductase 
Protein accessionYP_914759 
Protein GI119383703 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.440606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.83484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC CCCTGCCCGG CCAAGTGCGC CTCGACATCT TCGCCGATCC GGTCTGCCCC 
TGGTGCATGA TCGGCAAGGC CGAACTGGAC CAGGCGCTGG AAAGGCGGCC CGGCCACCCC
TTCGCCATCA CCTGGCAGCC CTTTCGCCTC GACCCGCAGA TGCCGCAGGC GGGCATGGAT
TACGTCGCCT ACATGAAGAT GAAATTCACC GACGAGAAGG GCATCCTCGC CGCCATGAAG
CCGGTGATGG AGGCCAGCGA GCGGCTGGGC CTTTGGATCA ACCCCTCGCT GATCGAGCGG
GTGCCGAACA CGCTCGACGC CCATCGCCTG CTTTATTGGG CGGGGCTGGA GGGCGTGCAG
ACCCCGGTCA TGTCCGGCCT GATGCGGGCG CATTGGCGCG AGGGCAGGAA CATCTCGAAC
CCCGACGTGC TCGCCCTCAT CGGCGAAAAG GCCGGCATGG ACGGCGGGAT GATCCGCCGG
CTTCTGGCCA CGGCCGAGGA CCGCGACCAG ATCGCCAGCC GCGAGATGCA TGCCCGGCAA
CGCGGCATCG CCTCGGTCCC GACCTTCATC GTCGCCGACA CCCATGTCGT CACCGGCGCA
CAGCCGGCGG GCCTGTGGCA GAACGTGATC GACGAACTGA CCGGCGGGCA AGCGCAATAG
 
Protein sequence
MTDPLPGQVR LDIFADPVCP WCMIGKAELD QALERRPGHP FAITWQPFRL DPQMPQAGMD 
YVAYMKMKFT DEKGILAAMK PVMEASERLG LWINPSLIER VPNTLDAHRL LYWAGLEGVQ
TPVMSGLMRA HWREGRNISN PDVLALIGEK AGMDGGMIRR LLATAEDRDQ IASREMHARQ
RGIASVPTFI VADTHVVTGA QPAGLWQNVI DELTGGQAQ