Gene Pden_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0929 
Symbol 
ID4579403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp909579 
End bp910364 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID639768250 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_914736 
Protein GI119383680 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CGACATTCAA CATCAACGGC GTCCGCGCCC GCATCGAGAC CCTGACCGGC 
TGGCTGTCCG AGGCCCAGCC CGACGTCGTG GTCCTGCAAG AGATCAAGGC CCAGGACGAG
GGCTTCCCGC GCGAACCCAT CGCCGACCTG GGCTACAATA TCGAAACCCA CGGGCAAAAG
GGCTTCAACG GCGTCGCCAT CCTGTCGAAG CTGCCGCTGG AGGATGTCAG CCGCGGCCTG
CCGGGCGACG AGACGGACGA ACAGGCCCGC TATATCGAGG CGACCGTGGT CGGCCACCGT
GCGGTGCGCA TCGCGGGGCT CTATTTGCCG AACGGCAACC CGCAGCCGGG GCCGAAATTC
GACTACAAGC TGGCCTGGAT GGAGCGGTTG CGCGCGCGGG CCAAGGCGCT GCTGGCGACC
GAGATGCCGG TGGCGATGAT GGGCGACTAC AACGTCATTC CCGAATCCCG CGACGCCGCC
TTTCCAGAAA AATGGCTGGA CGACGCGCTG TTCCAGCCCG AAAGCCGCGC CGCGCTGCGC
CGCATCCTGT TCGACGGCTG GGCCGATGCG GTGCGCCTGC GCCATCCGGG CAGCACGCGC
GGCCCCTTCA CCTTCTGGGA CTATCAGGCG GGGGCCTGGC AAAGGGACAA TGGCATCCGC
ATCGACCATG TGCTGCTGTC GCCCCAAGCC GCCGACCTGC TCATCGATGT CGGCATCGAC
CGCGACGAAC GCGCCAAGGA CAAGCCCAGC GACCACGTCC CGGTCTGGGT CGACCTGGAC
GCCTGA
 
Protein sequence
MKIATFNING VRARIETLTG WLSEAQPDVV VLQEIKAQDE GFPREPIADL GYNIETHGQK 
GFNGVAILSK LPLEDVSRGL PGDETDEQAR YIEATVVGHR AVRIAGLYLP NGNPQPGPKF
DYKLAWMERL RARAKALLAT EMPVAMMGDY NVIPESRDAA FPEKWLDDAL FQPESRAALR
RILFDGWADA VRLRHPGSTR GPFTFWDYQA GAWQRDNGIR IDHVLLSPQA ADLLIDVGID
RDERAKDKPS DHVPVWVDLD A