Gene Pden_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0896 
Symbol 
ID4578574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp879393 
End bp880181 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID639768216 
Producthypothetical protein 
Protein accessionYP_914703 
Protein GI119383647 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0019435 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.509637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAT CCAAATCCCG TTCGCGTAAC AAGTCGAACC GACAGCGTTC GCTGGGCAAT 
ATCGTCAACC GCGTCTTTGA TTCCTCGGGT CCCGAGGGCA AGGTGCGCGG CACGCCCCAG
CAGATCATCG AGAAATACCT GACGCTTGCC CGCGACGCCC AGCTTTCCAA CGACCGGGTG
GCCGAGCAGA GCTTTCTGCA ACACGCGGAA CATTACACCC GGCTTCTGGG TGAGGCGCAG
CGCGAACAGG CCGAGCGTCA GAGCCAGCAG CATCAGAATC GCGACGACGA TCTGCACGAC
GGCAACGGCC AGACCGCATC CGAGAACGGC AACGGCCATC ACGGCCACCG ACAGGAGCGT
CAGGACCGGC GCGACGATCG CCGCGACGAT CGCCGCGACG AGCGTCGCGA TGACCGCCGA
GAGGAACGTC GCGAGGATCG CCGGGAAGAA CGCCAGCCCG CCCCTCGCAC GGAAGAGCGT
GCCGAGCCGG CTGCTGCGCC CGCCGATGCC GGGTTGCCGC CGGTGATCTC CTCGGACGAG
GATGCCGCCG GCCCGGTCGA GACCCCGGAA AGCGCCGTCG AAGGACCCGC CGAGCCGGCC
GCTGCCCCTG CGGAAGAACC CGCCGCTGCC GAGCCGGCAC CGCGCCGTCG CAGCCGCACC
ACGACCGCGG CCGCACCGCG CAGCCGCAAG AAACCGGCCG AGGACGGCGC AAAGCCTGCG
GTAAAATCCG CGCGCGGGCA GGGTGCCAAG GCCGCAAAGG CCCAGCAGGA AAACGCCTCG
GGCGAGTGA
 
Protein sequence
MRSSKSRSRN KSNRQRSLGN IVNRVFDSSG PEGKVRGTPQ QIIEKYLTLA RDAQLSNDRV 
AEQSFLQHAE HYTRLLGEAQ REQAERQSQQ HQNRDDDLHD GNGQTASENG NGHHGHRQER
QDRRDDRRDD RRDERRDDRR EERREDRREE RQPAPRTEER AEPAAAPADA GLPPVISSDE
DAAGPVETPE SAVEGPAEPA AAPAEEPAAA EPAPRRRSRT TTAAAPRSRK KPAEDGAKPA
VKSARGQGAK AAKAQQENAS GE