Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0896 |
Symbol | |
ID | 4578574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 879393 |
End bp | 880181 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639768216 |
Product | hypothetical protein |
Protein accession | YP_914703 |
Protein GI | 119383647 |
COG category | [S] Function unknown |
COG ID | [COG5373] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0019435 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.509637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCAT CCAAATCCCG TTCGCGTAAC AAGTCGAACC GACAGCGTTC GCTGGGCAAT ATCGTCAACC GCGTCTTTGA TTCCTCGGGT CCCGAGGGCA AGGTGCGCGG CACGCCCCAG CAGATCATCG AGAAATACCT GACGCTTGCC CGCGACGCCC AGCTTTCCAA CGACCGGGTG GCCGAGCAGA GCTTTCTGCA ACACGCGGAA CATTACACCC GGCTTCTGGG TGAGGCGCAG CGCGAACAGG CCGAGCGTCA GAGCCAGCAG CATCAGAATC GCGACGACGA TCTGCACGAC GGCAACGGCC AGACCGCATC CGAGAACGGC AACGGCCATC ACGGCCACCG ACAGGAGCGT CAGGACCGGC GCGACGATCG CCGCGACGAT CGCCGCGACG AGCGTCGCGA TGACCGCCGA GAGGAACGTC GCGAGGATCG CCGGGAAGAA CGCCAGCCCG CCCCTCGCAC GGAAGAGCGT GCCGAGCCGG CTGCTGCGCC CGCCGATGCC GGGTTGCCGC CGGTGATCTC CTCGGACGAG GATGCCGCCG GCCCGGTCGA GACCCCGGAA AGCGCCGTCG AAGGACCCGC CGAGCCGGCC GCTGCCCCTG CGGAAGAACC CGCCGCTGCC GAGCCGGCAC CGCGCCGTCG CAGCCGCACC ACGACCGCGG CCGCACCGCG CAGCCGCAAG AAACCGGCCG AGGACGGCGC AAAGCCTGCG GTAAAATCCG CGCGCGGGCA GGGTGCCAAG GCCGCAAAGG CCCAGCAGGA AAACGCCTCG GGCGAGTGA
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Protein sequence | MRSSKSRSRN KSNRQRSLGN IVNRVFDSSG PEGKVRGTPQ QIIEKYLTLA RDAQLSNDRV AEQSFLQHAE HYTRLLGEAQ REQAERQSQQ HQNRDDDLHD GNGQTASENG NGHHGHRQER QDRRDDRRDD RRDERRDDRR EERREDRREE RQPAPRTEER AEPAAAPADA GLPPVISSDE DAAGPVETPE SAVEGPAEPA AAPAEEPAAA EPAPRRRSRT TTAAAPRSRK KPAEDGAKPA VKSARGQGAK AAKAQQENAS GE
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