| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0836 |
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| Symbol | |
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| ID | 4579451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 814575 |
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| End bp | 820856 |
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| Gene Length | 6282 bp |
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| Protein Length | 2093 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639768155 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_914644 |
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| Protein GI | 119383588 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGG ACCAAAGCGC CGTTGAAGAC AGTGATATCG CTATCATCGG CATGGCAGCC
CAGATTCCGG GCGCCCCGGG GGTCACCGAA TACTGGGACA ACCTGTGCCG CGGGGTCGAA
TCGATCCGGC GCATTCCCGA GGCCGACCTG ATCGCGAGAG GCGAGTCCCG GGCACGGCTT
TCGGACCCGA ATTACGTCCC CTCGGCGGCG GTGCTGGAGC AGTTCGACGA ATTCGACGCC
GAGTTCTTCG GGCTGTCGCC CAAGGAAGCG GCGATCATGG ACCCGCAGCA CCGCAAGTTC
CTGGAAACCT GCTGGCACGC GCTTGAGGAT GCCGCGCACG CGCCCGAGCG TTTCGCCGGC
AATATCGGCG TCTGGGCCGG CTGCGGCATG GGCAGCTATT ACTACTGGAA CGTCTGCTCG
AACCGCGACC TGGTCGATGG CGTCGGCCAT TTCCTGCTGC GCCATACCGG CAACGACAAG
GATTTCCTGT CCACCCGCGT CAGCCATGTC TTCGACCTCA AGGGGCCCAG TATCAGCGTG
CAGACCGCTT GCTCAAGCTC GCTGGTGGCC ATCCACATGG CCTGCCAGTC GCTGCAATCG
GGCGAATGCG ACATGGCGCT GGCCGGCGGC GTGACCATCG AGCTGCCGCA CGGGCTGGGC
TATCTCTACA AGGAGAACGA GATCCTGTCG CCCGACGGCC ATTGCCATGC CTTCGACCAT
CGCGCGCAGG GCACCGTCTT CGGCAGCGGC GCGGCGGTGG TGACGCTGCG GCGGCTCAGG
GACGCGCTGG CCGACGGCGA CCATATCTGG GCGGTCATCA AGGGATCGGC CATCAACAAC
GACGGCGCGG CCAAGGCGGG CTATCTGGCG CCCAGCGTCG AGGGCCAGGC GCAGGCCGTG
GCCGAGGCGC TGGCGATGGC GGGCCTTGCG TCGGACAGCA TCGGCTATGT CGAATGCCAC
GGCACCGGCA CGGCGCTGGG CGACCCGATC GAGGTGGCGG CGCTGAACCA GGCCTATGCG
CGGGTCTCGG ACGGCACGCG GCAGGGGCCG TGCCGCATCG GCTCGGTCAA GACCAATATC
GGCCATCTCG ACACGGCGGC GGGCAGCGCC GGGCTGATCA AGTCGGCGCT GGCGGTGCAT
CACGGAAAGA TCCCGCCCAG CCTGGGCTAT GAGGCGCCGA ACCCGGCCAT CGACTTCGAG
GGCGGGCCGT TCCAGGTCAA CGACCGGCTT TCGGACTGGC CGGTGCCGGG ACCGCGCCGG
GCCGGGGTGA ACTCGCTGGG CGTCGGCGGC ACCAATGCGC ATGTGATCGT GCAGGAACCG
CCGCTGGCCG AGGCGTCGGG GGAATCCGAC TGGCCGTTCC ACATCGTCGC CGTCTCGGGG
CGCAGCAAGG CGGCGCTGGA TGCCAATTCG GCGGCGTTGG CGGGCTGGCT GCGGGCCAAC
CCGGCCGTGA ACATGGCCGA CTTGTCCTTT ACCCTGACGC AGGGCCGGCG TCAGTTCGAC
CGCCGCCGCG TGCTGGTTGC CGAGACGGCG GCCGAGGCGG CGCGGCTTCT GGCCGATCCC
GATCCGCTGC TGGTCTTTGA CCACCAGCAG GCGGGCGACC CGGCCGAGGC GGTGTTCATG
CTGCCCGGCG GTGGCGCGCA ATATGCCGGC ATGGCGCGCG GGCTTTACCA GACCGAGCCG
GTGTTCCGCG AATGGATGGA CCGCGGCCTG GACCACATGG CGGCCGCGCA TGGCACCGAC
CTGCGCGCGC TGTGGTTGCC CGAACCGGGA GCCGAGGCCG AGGCGGACCG GCGGCTCTTG
CAGCCCTCGC TGCAACTGCC GCTGCTGATG ATCACCGAAT ATGCGCTGGC GCAGCTGTGG
ATCAGCTGGG GCGTGACGCC CGCCGCGCTG ATCGGCCATT CCATGGGCGA GAACACCGCC
GCCTGCATCG CGGGGGTGAT GAGCTTCGAG GATTGCATCG GCCTTGTGCG CCTGCGCGGG
CTGCTGTTCG ACAGGGTGCC GGCGGGCGGC ATGCTGTCGG TGCCGCTGGC CCCCGAGGAA
TTCGCCGCCG AACTGGCCGA GCTGGAGCTG GATCTTGCGG CGGTGAACGG GCCGGGCCTG
TCGGTGGTCT CGGGTCCCGA TGCGGTGCTG GACCGCTTTG CCGAACGCAT GGCGGCGCGC
GAGGTGGAAT GCCAGCGCAT CGCCATCTCC ATTGCCGCGC ATTCGCGGCT GCTCGACGGG
ATCCTGGACG AGTTCCGCGC CTATCTCGCC TCGATCCCGC TGAACGCGCC GCAGATCCCG
ATCGTCTCGA ACCGCACGGG CCAGGTGCTG ACCGCGGCCG AGGCCACCAG CCCCGACTAT
TGGGTCGCGC ATCTGCGCGG CACGGTGCGC TTTGCCGACG GCATCGCGCA TCTGGCGCAG
GTGCCGGGGC GAGTGTTCCT GGAAGTGGGC CCCGGCCGCG CCATGCAGGC CATGGCCAAG
GCGCATCCGG CGGTCGCCGC CAACCAGGTG ATCTCCACGC TGCGCCACCG CGATCACGCC
ACCGGCGACG ACAGCTATTT CATGGCTGCC CTGGCGCGGT TCTGGGCCTG CGGCGGGCTG
GTCGACTGGG ATCAGGTCTG GGGCGGCGCG CGGCGCCGGC GCCTGTCGCT GCCCGGCTAT
GCATTCCAGC GCAAGCGCTA TTTCATCGAG CGCGCCACCC ATGCCGCGAC CGAGGCCGCC
GAGGAACTGG CCCGGATCGA GGAGCCCGCG GATTGGGGCT GGCGCCCGGC ATGGAAACTC
GCCTCGCCCG CCATCGAGAT CGGGCCGCAG GGGCCCATGG TGCAGGGTGT GCAGAACTGG
CTGGTCTTTG CCGACGAGCT GGGCCTTGCC GGGCGCGTGA CCGATGCGCT GCGGTCCCGC
GGCCAGCGTG TCGCGGTGGT CGAGGTGGGC GATACCTTTG CCGATAAGGG CCAGGGCCGC
TTCACCCTGC CGGTGGAATC CGACCGCGAG GGTTATGAGA TGCTGCTGGC CGCGCTGGTC
GGGCAGGAGA TGGCGCCGGA TCGCATCCTG CATCTGTGGT CGGTGACGCA GGGCGCGCGT
TTCCGCCCCG GCTCCAGCCT GCTCAACAGC CAGTTGGAGC GCGGTTTCTT CGGCCTGCTG
CATCTGGCGC AGGCCATCGG CGCCGAACTG CCGGATGCGA AGCTGGAAGT GATCGCGGTC
TGCAACGACG CGCTGCGCGT GGCGGACGAG CCCGCGCCGG TGCCCGAAAA GGCCACCGCC
ACCGGGCCGA TCCGCGTCAT GCCGCATGAG ATGCCGAACG TCCGCGCACG GCTGGTGGAT
GTGCGTCTGC CGGCGAAAGG TCTGGACGCG CTGGCCGCCA ACCTGCTGGA AGAGGCGCTG
GCCCCCTCGG GCGCCGCCGT CGCCGCATGG CGCGACGGGC GCCGCTTTGA GCAAAGCCTT
GAGCGCGTCG CGCTGGCCGA TGACGGCATG GCCGCCATCC CGCAGGGCGC CGCCTGCCTG
ATCACCGGCG GTTTCGGCGG CATCGGCCAG GCCATCGCGC GCGAACTGGC GCAGCGGGGC
GGGGCGAAGC TGGCGCTGAC CACGCGCGGC CGGGTGGATT CGCCCGCCGT CGCCGCCTCG
GTGCGACAGT TGGAATCGCT GGGGGCCGAG GTGCTGGCGA TCCGCGCCGA CGTGACCTCG
CCCGAGGATA TGGCCCGGGC CGTGGCCGAG ACGCGGGCGC GCTTCGGCCG TCTCGACGTG
GTGCTGCATG CGGCCGGCGT GATCCGCGAC AGCCTGATCG CGGCCAAGAC CGACGACGAG
GCCTGGGACG TGCTGGCGCC GAAGCTGTTG GGCACCCGCG CGCTGGCCCA CGCGCTGGAC
GAGAATCCGG TCGGGCTGAC GGTGCTGTTT TCCTCGACCT CCTCGGTGAT CGCGCCGGCG
GGGCAGGCGG ATTACGTCGC CGCCAACGAA TACCTGAACG CCGTGGCGCG CTCGGCGCCG
CAGGCGCTGG GCCGGGTGGT CGCGGTCAAC TGGGGCGTCT GGGCCGATGC CGGCATGGCG
GCGCGGGCCA TGGGGCTCGA CACCGCCTCG GCCGTGGCGG TGCCGCAGGG TCGGCCGCTG
CTGGACGAAA GCCTGCCCAT GCCGGGCGGA CGCGAGTTCC GCACCGCGCT GAAGATGCAG
GACTGGATCA TCGGCGGCCA CAAGACCGCC GCCGGCCAGG CGCTGATGCC CGGCACCGGC
TGGATCGAAC TGGTCGCCGA GGCGGCGCTG GAATGCGGGC TGAGCCTGCC GCTGGCGATC
CGCGACCTGG AATTCCGCCG CCCGGTTCTG GTCTCGGACA CCGCGCTGGT CAGCACCCGC
GTCTCGCCCG AGGGCGATGA GATGCGCATC GAGATCCTGG ACGATCCGCA GGGCGAGCCG
AATGTCTCGG CGCTGGTCGC CGGATTGCCC GAGGCGGCGC CCGAGGCGCT GCAACCCGCC
GGCGGCTGGG ACCGGGACGG GCAGGGTGCG GCCATCCCCT CGGCGCAGGA AGGCCGGATG
GCTTTCGGCC CGCGCTGGAA GGTGCTGCGC CGTTTCCGCA TCACCGGCGA CGAGGGCGTG
GCGGAGCTGT CGCTCGACCC CGAATTCGCC GCCGAAGCCG GGGAATGGCT GGCGCATCCG
GCGCTTCTGG ACATTGCCAC CGGCTGGGCC ATGCAGCTGA TCAAGGGCTG GACGCCCGAG
CATCTCTGGG TGCCGATGGG CTATGGCTCG ATCCGGCTTT ACGCGCCCTT GCCGGCGCAG
GTCACCAGCC GCATCCGCAA TGCCGGGGAG AACACCGACG CGCAGGGCAT GGCGCAATTC
GACATCACGC TGGCGGCGCC GGACGGCGGG GTTGTCGCGG AAATCAAGGG CTTTGCGCTG
CGCAAGCTGG CGGCGGCGAT TTCCGCCACG CCCGCGCGCA GCCAGCCGCC GCGCAGCCTG
TCCCCGGCCG AGCGTCGCCT GCATCACAAC ATCAGCCAGG GCATCCCCGC CGCCATCGGC
CCGGCGATGC TGAGCCGGGC GATCTCGACC GGGCTTTCGC AGGTTTATGT CTCGTCTCTG
GCGCTGCCCG CGCTGATCGC CGAGGCCGGC GTGACCGAGG ATGCCGCGCC CGCCGAGGGC
GGCTTCGAGC GCCCCGACCT CGACAGCGAT TTCGTCGCGC CGGCGCCGGG CATCCAGGCC
GAACTGGCGG CGATCTGGTC CGAACTCCTG GGCATCGCCC AGGTCGGCGC CGCCGACAGC
TTCTTCGACC TTGGCGGCCA TTCGCTGATC GCGGTGCGCA TGTTCGGCCA GTTGCGCAAG
AAATTCGGCG TGGACCTGCC GATCTCGACG CTTTTCGAGG CGCCGACCAT CGCCGAACTG
GCCGCATTGG TCGAGGAACG CACCGGCCCG CGCGAACTGG TCTCGCCCGA CAATGTGCGC
GAATTGCCGG TCTCGGCCCG GCCTCGCTTC CGCTTCCTCG TCGATATGGG CGGGCGGGGC
GATGGCACGC CCTTCTTCAT GGTCGCCGGC ATGTTCGGCA ATATCATGAA CCTGCGCCAG
CTGGCGCAGC GGCTGGGGCC GGATCGCCGC TTCTGGGGCA TCCAGGCGCG CGGCCTTCTG
GGCGACGACA AGCCGCATGA GGATCTCGCC GAGGCCGCCC GCGACTATAT CGAGGAACTG
CGCCAGGTGC AGCCCGAGGG TCCCTATCTG ATCGGCGGTT TCTCGGGCGG CGGGCTGACG
GCCTATGAGA TGGCGCGGCA GTTGCGCGCG GCGGGCGAGG AGGTGGCGAT GCTGGTCATG
CTGGACACGC CCTTGCCGCT GCGCGAGCCG GTCGGCCGCA AGGACCGGCT GATGATCCGC
CTGGGCGAGC TGCGCGAAGG CGGGCCGGGC TTCGTCTGGA AATGGCTGCG CGACCGCGTG
GCCTATGAGT TCCGGCGCCG CAGCAAGGCC AAGGCGGTCG AGGCCGAGGT CGGCGCGCAG
GCGACCGGCG CCTTCCACGA CCTGGCCATC GAGGCGGCCT TCCTCGCGGC GCTGCCCAAG
ATGCGGCTGT CGGTCTGGGA CGGGCCGGTG GCGATGTTCC GGCCGCCGCT GGACAAGCGC
TGGAAGGTGA CGGGCGGGCG CTGGATCAAT TCGGGGCGCG ATTATGTCGT CGAGGATAAC
GGCTGGACGC CCTGGATGCC CGACCTGCGG GTGATCGAGG TGCCGGGCGA CCACGATTCG
ATGGTGCTGG AGCCGAACGT GCGCCGCCTT GCCTCGGTCC TGCGCGAGAT CCTGCGCGAT
GCCGATGCGG ACGCCCCGGC CGGGATCAAG GCGGCGGAGT GA
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| Protein sequence | MALDQSAVED SDIAIIGMAA QIPGAPGVTE YWDNLCRGVE SIRRIPEADL IARGESRARL
SDPNYVPSAA VLEQFDEFDA EFFGLSPKEA AIMDPQHRKF LETCWHALED AAHAPERFAG
NIGVWAGCGM GSYYYWNVCS NRDLVDGVGH FLLRHTGNDK DFLSTRVSHV FDLKGPSISV
QTACSSSLVA IHMACQSLQS GECDMALAGG VTIELPHGLG YLYKENEILS PDGHCHAFDH
RAQGTVFGSG AAVVTLRRLR DALADGDHIW AVIKGSAINN DGAAKAGYLA PSVEGQAQAV
AEALAMAGLA SDSIGYVECH GTGTALGDPI EVAALNQAYA RVSDGTRQGP CRIGSVKTNI
GHLDTAAGSA GLIKSALAVH HGKIPPSLGY EAPNPAIDFE GGPFQVNDRL SDWPVPGPRR
AGVNSLGVGG TNAHVIVQEP PLAEASGESD WPFHIVAVSG RSKAALDANS AALAGWLRAN
PAVNMADLSF TLTQGRRQFD RRRVLVAETA AEAARLLADP DPLLVFDHQQ AGDPAEAVFM
LPGGGAQYAG MARGLYQTEP VFREWMDRGL DHMAAAHGTD LRALWLPEPG AEAEADRRLL
QPSLQLPLLM ITEYALAQLW ISWGVTPAAL IGHSMGENTA ACIAGVMSFE DCIGLVRLRG
LLFDRVPAGG MLSVPLAPEE FAAELAELEL DLAAVNGPGL SVVSGPDAVL DRFAERMAAR
EVECQRIAIS IAAHSRLLDG ILDEFRAYLA SIPLNAPQIP IVSNRTGQVL TAAEATSPDY
WVAHLRGTVR FADGIAHLAQ VPGRVFLEVG PGRAMQAMAK AHPAVAANQV ISTLRHRDHA
TGDDSYFMAA LARFWACGGL VDWDQVWGGA RRRRLSLPGY AFQRKRYFIE RATHAATEAA
EELARIEEPA DWGWRPAWKL ASPAIEIGPQ GPMVQGVQNW LVFADELGLA GRVTDALRSR
GQRVAVVEVG DTFADKGQGR FTLPVESDRE GYEMLLAALV GQEMAPDRIL HLWSVTQGAR
FRPGSSLLNS QLERGFFGLL HLAQAIGAEL PDAKLEVIAV CNDALRVADE PAPVPEKATA
TGPIRVMPHE MPNVRARLVD VRLPAKGLDA LAANLLEEAL APSGAAVAAW RDGRRFEQSL
ERVALADDGM AAIPQGAACL ITGGFGGIGQ AIARELAQRG GAKLALTTRG RVDSPAVAAS
VRQLESLGAE VLAIRADVTS PEDMARAVAE TRARFGRLDV VLHAAGVIRD SLIAAKTDDE
AWDVLAPKLL GTRALAHALD ENPVGLTVLF SSTSSVIAPA GQADYVAANE YLNAVARSAP
QALGRVVAVN WGVWADAGMA ARAMGLDTAS AVAVPQGRPL LDESLPMPGG REFRTALKMQ
DWIIGGHKTA AGQALMPGTG WIELVAEAAL ECGLSLPLAI RDLEFRRPVL VSDTALVSTR
VSPEGDEMRI EILDDPQGEP NVSALVAGLP EAAPEALQPA GGWDRDGQGA AIPSAQEGRM
AFGPRWKVLR RFRITGDEGV AELSLDPEFA AEAGEWLAHP ALLDIATGWA MQLIKGWTPE
HLWVPMGYGS IRLYAPLPAQ VTSRIRNAGE NTDAQGMAQF DITLAAPDGG VVAEIKGFAL
RKLAAAISAT PARSQPPRSL SPAERRLHHN ISQGIPAAIG PAMLSRAIST GLSQVYVSSL
ALPALIAEAG VTEDAAPAEG GFERPDLDSD FVAPAPGIQA ELAAIWSELL GIAQVGAADS
FFDLGGHSLI AVRMFGQLRK KFGVDLPIST LFEAPTIAEL AALVEERTGP RELVSPDNVR
ELPVSARPRF RFLVDMGGRG DGTPFFMVAG MFGNIMNLRQ LAQRLGPDRR FWGIQARGLL
GDDKPHEDLA EAARDYIEEL RQVQPEGPYL IGGFSGGGLT AYEMARQLRA AGEEVAMLVM
LDTPLPLREP VGRKDRLMIR LGELREGGPG FVWKWLRDRV AYEFRRRSKA KAVEAEVGAQ
ATGAFHDLAI EAAFLAALPK MRLSVWDGPV AMFRPPLDKR WKVTGGRWIN SGRDYVVEDN
GWTPWMPDLR VIEVPGDHDS MVLEPNVRRL ASVLREILRD ADADAPAGIK AAE
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