Gene Pden_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0832 
Symbol 
ID4579447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp808868 
End bp809902 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content71% 
IMG OID639768151 
ProductABC transporter related 
Protein accessionYP_914640 
Protein GI119383584 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCC TGACCCTTGA TCACCTGCAG AAATCCTTTG GCGCGACCCG GGTCGTGCAT 
GACTTCGACC TGGCCATCGA GAAGGGCGAG TTCGTGTCTT TCCTGGGTCC TTCGGGCTGC
GGCAAGACCA CGGTGCTGCG CATGGTCGCG GGGTTCGAGA CGCCTACGGC GGGCCGGGTG
GTGATCGACG GGCAGGACGT GACCCGGGCA CGCCCGAACC AGCGCCAGAT CGGCATGGTG
TTCCAGTCCT ATGCGCTGTT CCCGAACCTG ACCGTGGCCG AGAACGTGGG CTTCGGCCTG
CGCGTCGCCG GCGTCCCGCG CGCCGACCGC GCCGGCCGCG TGGCCGAGAT GCTGGACCTG
ATCGGCCTGC CCGACCTGGG CGGGCGCTAT CCCTGGCAGC TTTCGGGCGG CCAGCAGCAG
CGCGTGGCGC TGGCCCGGGC CCTGGCGCCG CGCCCGCGGG TGCTGCTGCT GGACGAGCCG
CTTTCGGCGC TGGATGCCAA GATCCGCGTC AGCCTGCGCA ACCAGATCCG CGAGATCCAG
CAGCAGCTTG GCATCACCAC CATCTTTGTC ACCCATGACC AGGAAGAGGC GCTGTCGATT
TCCGACCGCA TCGTGGTCAT GCACAAGGGC ATCGCCGACC AGACCGGCAC GCCCGCGCAG
ATCTACAACC AGCCCGCCAC GGATTTCGTC GCCGGCTTCG TCGGCACCCT GAACCGCTTC
GAGGCCGAGG TGCTGGACGC CGCCCGCGGC CTTGTCCGGG TCGAGGGCGC CGAGATCGCG
CTGGACCGGC CGCTGCCCGC CGGGCGCATC ACCTTGGCGG CGCGGCCCGA AAGCCTGCGC
ATTGCGCCCG ATGGCATCCC GGCCGAGATC ACCGGCGTCG AGTTCCTGGG CTCGGTCCAG
CGCCTGCGGG CGCGGGCGGC CGGGCGCGAG GTGGTGCTGG ACCGTTTCAA CGAACCGGGG
GCCGAATTGC CAAGCCCCGG CGCGCAGGTG CGTCTTGCGG CGCCGGGGGC CGGCTGGCTG
GTTCTGACCG GCTGA
 
Protein sequence
MSFLTLDHLQ KSFGATRVVH DFDLAIEKGE FVSFLGPSGC GKTTVLRMVA GFETPTAGRV 
VIDGQDVTRA RPNQRQIGMV FQSYALFPNL TVAENVGFGL RVAGVPRADR AGRVAEMLDL
IGLPDLGGRY PWQLSGGQQQ RVALARALAP RPRVLLLDEP LSALDAKIRV SLRNQIREIQ
QQLGITTIFV THDQEEALSI SDRIVVMHKG IADQTGTPAQ IYNQPATDFV AGFVGTLNRF
EAEVLDAARG LVRVEGAEIA LDRPLPAGRI TLAARPESLR IAPDGIPAEI TGVEFLGSVQ
RLRARAAGRE VVLDRFNEPG AELPSPGAQV RLAAPGAGWL VLTG