Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0780 |
Symbol | secY |
ID | 4579999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 755600 |
End bp | 756973 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639768099 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_914588 |
Protein GI | 119383532 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCAG CCGCAGAACA GATGGCCGCG AACCTTTCCT GGGGCGCGCT CGGCAAGGCG ACCGAGCTGC GCCAGAGAAT CTGGTTCACC CTCGGACTTC TCATCATCTA CCGCCTCGGC ACCTACATCC CGGTGCCCGG CATCGACGGC GCCGCGCTGC GCAACTTCAT GGACCAGGCG CAGGCCGGCA TCGGCGGCAT CCTGTCCATG TTCACCGGCG GCGCGCTGGG ACGGATGGGC GTCTTTGCGC TCGGCATCAT GCCCTATATC TCGGCCTCCA TCATCGTGCA GCTGCTGGCC TCGATGGTCC CGGCGCTGGA GCAGATGAAG AAAGAGGGCG AGCAGGGCCG CAAGAAGATC AACCAGTACA CCCGCTACGG CACGGTGGCG CTGGCGCTGT TCCAGGCCTG GGGCCTTGCC GTCAGCCTGG AGCACGGCAA CCTCGCGCAT GAGCCGGGGA TGTTCTTCCG CGCCTCGGTG GTGATCACGC TGGTCGGCGG CACCATGTTC CTGATGTGGC TGGGCGAGCA GATCACCGCC CGCGGCATCG GCAACGGCAT CTCGCTGATC ATCTTCGTCG GCATCGTGGC CGAGATCCCC GGCCACCTGG CGCAATTCCT GGCCCAGGGC CGTTCGGGCG CCGTCTCGAC GCCGGTGATC CTGGGCGTGA TGATCATGGT CGCCGCGGTG ATCGCCTTCG TGGTGTTCAT GGAACGCGCC CTGCGCAAGA TCCATATCCA GTATCCGCGC CGCCAGGTCG GGATGAAGGT CTATGACGGC CAGTCGTCGC ATCTGCCGAT CAAGGTGAAC CCGGCGGGGG TGATCCCGGC GATCTTCGCC AGTTCGCTGC TGCTCCTCCC GGTGACGATC TCGACCTTCT CGGGCAACCA GACCGGCCCG ATCATGTCGA CGGTCCTGGC CTATTTCGGT CCCGGCCAGC CGCTCTACCT GCTGTTCTTC GCGGCGATGA TCGTGTTCTT CACCTATTTC TACACATACA ACGTCAGCTT CAAGACCGAG GACGTGGCCG AGAACCTGAA GAACCAGGGC GGCTTCATTC CCGGCATCCG CCCGGGCAAG CGGACCGAGG ATTACCTGAC CTATGTGGTG ACCCGGGTGC TGGTGATCGG TTCGGCCTAC CTGGCCTTCG TCTGCCTGCT GCCCGAGATC ATCCGCGACC AGCTGGCGAT CCCCTTCTAC TTCGGCGGAA CCTCGGTGCT GATCGTGGTC AGCGTCGTCA TGGACACGAT CAACCAGGTG CAAAGCCACT TGCTCGCCCA TCAATACGAA GGTTTGATCG AAAAATCGCA ATTGCGCGGC AAGCGTGGCA AGACCGGGGC GGCCAAGCCC CGCAAGGCCC CGGCACGTCG CTGA
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Protein sequence | MASAAEQMAA NLSWGALGKA TELRQRIWFT LGLLIIYRLG TYIPVPGIDG AALRNFMDQA QAGIGGILSM FTGGALGRMG VFALGIMPYI SASIIVQLLA SMVPALEQMK KEGEQGRKKI NQYTRYGTVA LALFQAWGLA VSLEHGNLAH EPGMFFRASV VITLVGGTMF LMWLGEQITA RGIGNGISLI IFVGIVAEIP GHLAQFLAQG RSGAVSTPVI LGVMIMVAAV IAFVVFMERA LRKIHIQYPR RQVGMKVYDG QSSHLPIKVN PAGVIPAIFA SSLLLLPVTI STFSGNQTGP IMSTVLAYFG PGQPLYLLFF AAMIVFFTYF YTYNVSFKTE DVAENLKNQG GFIPGIRPGK RTEDYLTYVV TRVLVIGSAY LAFVCLLPEI IRDQLAIPFY FGGTSVLIVV SVVMDTINQV QSHLLAHQYE GLIEKSQLRG KRGKTGAAKP RKAPARR
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