| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0774 |
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| Symbol | rplF |
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| ID | 4579993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 752213 |
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| End bp | 752746 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639768093 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_914582 |
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| Protein GI | 119383526 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.498464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.859655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCGGA TTGGTAAAAA GCCGGTCGCC CTCCCCAAGG GCGTGACCGC GGAGATCAAG
GGCCAGACCA TCGAGGTCAA GGGTCCGAAA GGCACCCGCA GCTTTACTGC GACCGACGAC
GTGACGCTGG CCATCGAGGA GGGCGCCGTC AAGGTGACCC CGCGCGGCCT GTCGAAACGC
GCCCGTCAGC AATGGGGCAT GACCCGCTCG ATGGTCGAGA ACCTGACCGT CGGCGTCAGC
GAAGGCTTCA AGAAAGAGCT GGAGATCCAG GGCGTCGGCT ACCGCGCCCA GATGCAGGGC
AAGACCCTGA AGCTCGCGCT GGGTTATTCG CATGACGTGA ACTTCGAAAC GCCGGAAGGC
GTGACCATCT CGGCTCCGAA ACAGACCGAG ATCGTGGTGG AAGGCATCGA CCAGCAGCTG
GTCGGCCAGG TCGCCGCGAA CATCCGCGAG TGGCGCCGCC CCGAGCCCTA CAAGGGCAAG
GGCATCCGCT ACAAGGGTGA GGTCGTCTTC CGCAAGGAAG GCAAGAAGAA GTAA
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| Protein sequence | MSRIGKKPVA LPKGVTAEIK GQTIEVKGPK GTRSFTATDD VTLAIEEGAV KVTPRGLSKR
ARQQWGMTRS MVENLTVGVS EGFKKELEIQ GVGYRAQMQG KTLKLALGYS HDVNFETPEG
VTISAPKQTE IVVEGIDQQL VGQVAANIRE WRRPEPYKGK GIRYKGEVVF RKEGKKK
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