Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0765 |
Symbol | rpsC |
ID | 4580063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 748367 |
End bp | 749089 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639768084 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_914573 |
Protein GI | 119383517 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01008] ribosomal protein S3, eukaryotic/archaeal type [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0970425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.512197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGA AGGTAAACCC CATCGGGATG CGTCTCCAGG TCAACCGCAC CTGGGACAGC CGCTGGTATG CGGATGACAA GGACTACGGC AATCTGCTGC TGGAAGACCT GAAGATCCGC GACTTCATCA AGAAGGAAGC GAAGCAGGCC GGCGTCAGCC GCGTCGTGAT CGAGCGTCCG CACAAGAAAT GCCGCGTGAC GATCTATGCC GCGCGCCCGG GTGTCATCAT CGGCAAGAAA GGCGCCGATA TCGAGACCCT GCGCAAGAAG CTGGCGAACT TCACCGGCTC GGAACTGCAC CTCAACATCG TCGAGGTTCG CAAGCCCGAA CTGGACGCCC AGCTGGTGGC CGAGTCGATC GCCCAGCAGC TCGAGCGCCG GGTGTCGTTC CGCCGCGCCA TGAAGCGTGC GGTGCAGAAC GCCATGCGCA TGGGTGCCCT GGGCATCCGG GTGAACGTGT CGGGCCGCCT TGGCGGCGCC GAGATCGCCC GCACCGAATG GTATCGCGAG GGCCGGGTGC CGCTGCACAC GCTGCGCGCC GACATCGACT ATGCGCTGTC GGAGGCCTCG ACCCCCTACG GGATCATCGG CGTGAAGGTC TGGATCTTCA AGGGCGAGAT CATGGAGCAC GATCCGCAGG CCCGCGACCG CCGCGCCACC GAAGCGCAGG ACGGCCCGTC GCCCCGCGGC CCGCGCCGTG ATCGCGACCG CGACGCGCGC TAA
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Protein sequence | MGQKVNPIGM RLQVNRTWDS RWYADDKDYG NLLLEDLKIR DFIKKEAKQA GVSRVVIERP HKKCRVTIYA ARPGVIIGKK GADIETLRKK LANFTGSELH LNIVEVRKPE LDAQLVAESI AQQLERRVSF RRAMKRAVQN AMRMGALGIR VNVSGRLGGA EIARTEWYRE GRVPLHTLRA DIDYALSEAS TPYGIIGVKV WIFKGEIMEH DPQARDRRAT EAQDGPSPRG PRRDRDRDAR
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