Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0745 |
Symbol | rplJ |
ID | 4579613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 726682 |
End bp | 727197 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639768064 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_914553 |
Protein GI | 119383497 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00501407 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGATAGAG CGCAAAAAGA ACAGGTGGTC GAAGAACTCG GCCAGATCTT TGATGCCTCT GGCGTCGTGG TGGTTGCCCG CTACGAGGGA ATGACGGTTG CCGAAATGCA GGACCTGCGC GCGCAGATGC GCGACGCCGG CGGGTCCGTG CGCGTTGCCA AGAACAGGCT CGCCAAGATC GCCCTGGATG GAAAGCCTTG CGCCAGCATC GCCGACTATC TGACGGGCAT GACCGTGCTC GCCTTCTCCG ATGACCCGGT GGCTGCCGCC AAGGTCGCGG ACAAATACGC CAAGGGGAAC GACAAGTTCG TGATCCTGGG CGGTGCGATG GGCGACACGG CGCTTGACCC GGCCGGTGTG AAAGCCGTGG CCCAGATGCC GTCGCGCGAG GAGCTTATCG CTTCGATCGT GGCTTGCATC GGTGCCCCCG CTTCCAACAT CGCGGGCGCG ATCGGCGCAC CTGCTTCCAA CATCGCTGGC ATTCTCGCGA CTCTGGAAGA GCGCGAGGCT GCCTGA
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Protein sequence | MDRAQKEQVV EELGQIFDAS GVVVVARYEG MTVAEMQDLR AQMRDAGGSV RVAKNRLAKI ALDGKPCASI ADYLTGMTVL AFSDDPVAAA KVADKYAKGN DKFVILGGAM GDTALDPAGV KAVAQMPSRE ELIASIVACI GAPASNIAGA IGAPASNIAG ILATLEEREA A
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