Gene Pden_0745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0745 
SymbolrplJ 
ID4579613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp726682 
End bp727197 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content64% 
IMG OID639768064 
Product50S ribosomal protein L10 
Protein accessionYP_914553 
Protein GI119383497 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00501407 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGATAGAG CGCAAAAAGA ACAGGTGGTC GAAGAACTCG GCCAGATCTT TGATGCCTCT 
GGCGTCGTGG TGGTTGCCCG CTACGAGGGA ATGACGGTTG CCGAAATGCA GGACCTGCGC
GCGCAGATGC GCGACGCCGG CGGGTCCGTG CGCGTTGCCA AGAACAGGCT CGCCAAGATC
GCCCTGGATG GAAAGCCTTG CGCCAGCATC GCCGACTATC TGACGGGCAT GACCGTGCTC
GCCTTCTCCG ATGACCCGGT GGCTGCCGCC AAGGTCGCGG ACAAATACGC CAAGGGGAAC
GACAAGTTCG TGATCCTGGG CGGTGCGATG GGCGACACGG CGCTTGACCC GGCCGGTGTG
AAAGCCGTGG CCCAGATGCC GTCGCGCGAG GAGCTTATCG CTTCGATCGT GGCTTGCATC
GGTGCCCCCG CTTCCAACAT CGCGGGCGCG ATCGGCGCAC CTGCTTCCAA CATCGCTGGC
ATTCTCGCGA CTCTGGAAGA GCGCGAGGCT GCCTGA
 
Protein sequence
MDRAQKEQVV EELGQIFDAS GVVVVARYEG MTVAEMQDLR AQMRDAGGSV RVAKNRLAKI 
ALDGKPCASI ADYLTGMTVL AFSDDPVAAA KVADKYAKGN DKFVILGGAM GDTALDPAGV
KAVAQMPSRE ELIASIVACI GAPASNIAGA IGAPASNIAG ILATLEEREA A