Gene Pden_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0732 
Symbol 
ID4579600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp714698 
End bp715789 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content68% 
IMG OID639768050 
ProductDNA-directed DNA polymerase 
Protein accessionYP_914540 
Protein GI119383484 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.833353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0993965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCG ATCCGACCGA GCGCATAAGG CGGATCGTGC ATGTGGACAT GGACGCCTTC 
TATGCCTCGG TCGAGCAGCG CGACGACCCG GCCCTGCGCG GCAAGCCCGT CGCCGTGGGC
GGCATCCAGC GCGGCGTCGT GGCGGCGGCC AGCTACGAGG CGCGGCGCTA TGGCGTGCGC
TCGGCCATGC CCTCGATGCG GGCGATGCGG CTTTGTCCCG ACCTGATCTT CGTGAAGCCG
CGCTTCGACG TCTATCGTGC CGTCAGCCAG CAGGTCCGCG CGATCTTTGC CGAATACACC
CCGCTGGTCG AGCCGCTGTC GCTGGACGAA GCCTATCTGG ACCTGACCGA CCACCTGAAC
GGCTCGACCG CCACCCGCAT CGCCAAGGAG ATCCGGGCGC GCATCCGCGA GGCGACCGGG
CTGACCGCCT CGGCCGGGGT CAGCTACAAC AAGTTCCTGG CCAAGCTGGC CTCGGACCAG
CGCAAGCCCG ACGGGCTGTT CGTGATCCCG CCCGAGGCGG GGGCAGAGTT CGTGCAGGGC
CTGCCCATCG GCCGCTTCCA CGGTATCGGC CCGGCCACGG CGGCGCGGAT GGAGGCGCAT
GGCATCCTGA CCGGCGCCGA CCTTGCCCGG CAGAGCCTGG ATTTCCTGAC CGCGCGCTTT
GGCAAGTCGG GTGCCTATTA CTGGAATATT TCCCGCGGCA TCGACACGCG CGAGGTCAAG
CCGGACCGCA TCCGCAAGAG CATCGGCGCC GAGAACACCT ATTTCGAGGA TCTGCGCGAC
ATTGCTGCGG CGCATGAGGC GCTGGCGGTG CTGGCCGACA AGGTCTGGCG CCACACGACC
ACGGCTGCCC TGCGCGGGCG GACGGTGACG CTGAAGGTGA AATACGGCGA TTTCCGCCAG
ATCACCCGGG CGCGATCCCT GCCGCGCGCC GTCGAGAGCC GCGACGAAAT GCTGGAAATG
GCCTGCGAAT TGCTGGCGCC GGTCTTTGCC GATCCGCATG GCGTGCGGCT GCTGGGCATC
ACCCTGTCGG GACTGGAGGA GGCGCGGCAG GACGAGCCGC CGCGCCAGCT GGGCCTGTTC
GATCAGGCGT AA
 
Protein sequence
MTPDPTERIR RIVHVDMDAF YASVEQRDDP ALRGKPVAVG GIQRGVVAAA SYEARRYGVR 
SAMPSMRAMR LCPDLIFVKP RFDVYRAVSQ QVRAIFAEYT PLVEPLSLDE AYLDLTDHLN
GSTATRIAKE IRARIREATG LTASAGVSYN KFLAKLASDQ RKPDGLFVIP PEAGAEFVQG
LPIGRFHGIG PATAARMEAH GILTGADLAR QSLDFLTARF GKSGAYYWNI SRGIDTREVK
PDRIRKSIGA ENTYFEDLRD IAAAHEALAV LADKVWRHTT TAALRGRTVT LKVKYGDFRQ
ITRARSLPRA VESRDEMLEM ACELLAPVFA DPHGVRLLGI TLSGLEEARQ DEPPRQLGLF
DQA