Gene Pden_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0706 
Symbol 
ID4580647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp687224 
End bp688183 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content67% 
IMG OID639768024 
Producthypothetical protein 
Protein accessionYP_914514 
Protein GI119383458 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.227695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATA ATCGCCAGAC GGGGCCGCTG ATGGCCCCGG CAGCCCGTCC GCCTGCCGTG 
CCGCCGCCGC TTGCGGCGCC GCGCAACGAC CGACAAGGCA CGGCGATCCT GCTGATCTGC
GCCTCGGCGC TGATCTTTGC GGCACAGGAC GGCATCTCGC GCTATCTGGG CGCGGCCTAT
TCTCCGATCT TCGTCATCAT GCTGCGGTTC TGGTTCTTCG CGGTATTCGT CATCCTGCTG
TGCGCCCGCG CACCGGGCGG GCTCGGCCGC GCCATGCGCT CGAAGCGGCC ATGGACGCAG
ATCTTCCGCG GCGTGCTTCT GGTGGCAGAG GTCGTGGTCA CGGTCGAGGC CTTCGTGCGG
CTGGGCCTGA TCAACACCCA TGCGATCTTT GCCTGCTATC CGCTGCTGAT CTCGGCGCTG
TCGGGGCCGT TCCTGGGCGA AAAGGTCGGC TGGCGCCGCT GGGTTGCGGT CGCGGTGGGC
TTTGCCGGCA TCCTGATCGT GCTGAAACCG GGCAGCGGCG TCTTCAGCGC CGATGCGGTG
CTGCCCTTCG TCGGCGCGGC CATGTTCGCG GTCTATGGCC TGCTGACCCG GCTGGTCGGG
CGCGACGATC CGGCCATGGT CAGCTTTTTC TGGACCGGCA TCGCCGGGGC CGTCGCCATC
ACCCTGGTCG GCGTCTGGCA TTGGGAACCC ATCGCCGGGC GCGACATTCC CTGGCTTCTG
CTGCTGTGCC TGACGGCGGT GGTGGCGCAT TTCATGCTGA TCAAGGCCTA TGAGCTTGCA
GAAGCCTCGG CCTTGCAGCC GTTTTCCTAT ACCCAGCTGG TCTGGGTCAG CATCTTCGGC
GTAGTGATCT TTGGCGAGAC GCTGGCGCCG AACGTCGCCA TCGGCGGGCT CATCGTCGTC
GGCGCCGGCC TGTTCACCTG GTGGCGCGCA CGCCAGCGCG AGCGGGCCGG ACAGGGTTGA
 
Protein sequence
MPNNRQTGPL MAPAARPPAV PPPLAAPRND RQGTAILLIC ASALIFAAQD GISRYLGAAY 
SPIFVIMLRF WFFAVFVILL CARAPGGLGR AMRSKRPWTQ IFRGVLLVAE VVVTVEAFVR
LGLINTHAIF ACYPLLISAL SGPFLGEKVG WRRWVAVAVG FAGILIVLKP GSGVFSADAV
LPFVGAAMFA VYGLLTRLVG RDDPAMVSFF WTGIAGAVAI TLVGVWHWEP IAGRDIPWLL
LLCLTAVVAH FMLIKAYELA EASALQPFSY TQLVWVSIFG VVIFGETLAP NVAIGGLIVV
GAGLFTWWRA RQRERAGQG