Gene Pden_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0679 
Symbol 
ID4578749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp662118 
End bp662828 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID639767997 
ProductAsp/Glu racemase 
Protein accessionYP_914487 
Protein GI119383431 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0768431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.106443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTAG TGGTGGAAAT CCTGGTCGTC AATCCGAACT CGACCCAGTC AATGACCGAC 
AAGATCGTCG AGGCCGCCCG CGCGGTCGCC AGCCCCGGGA CGGTGATCCA TGGCGCCACC
GCCGCCGGTG CGCCCGCCAG CATCGAAGGG CATTACGACG AGGCGATGTC CCTGCCCGGC
CTGATGGCGC GGGTCCGCGA GGCCGAGGCG AAGGGAATCG ACGGCATCGT CGTCGCCTGC
TTCGACGATC CGGGCATCGC CGCCTGCCGC GAACTGGCCA GCGGCCCGGT GCTGGGCATC
TGCGAGGCCG CGGTAAAGGC GGCCAGCATG CTGGCGACCT CGTTTTCCGT CGTGACCACG
CTGCCGCGCT CGGTCCCGGT GATCGAGCAC CTGATCCACG GCTACGGCCT GTCGCATCAA
TGCCGCCGCG TGCGCTCGGC GGCGATCCCG GTGCTGGCGC TGGAGGAGCC CGGCTCGAAC
GCACGCATCA AGGTCCGCGA CGAAATCCTG TGCGCCATCC GCGAGGACCG CTGCGAAGCC
GTGGTTCTGG GCTGCGCCGG CATGGCCGAC CTGACGGCCT GGCTCAGCGA GGAAACCGGC
ATTCCCGTCA TCGACGGCGT CAGCGTCGCG ACCCGCATGA TCGAGGCGCT GGTGGGCGCG
GGACTGAAGA CCAGCAAGAT CAACGCCTAC GCTTTCCCCA ACGAAAAATA G
 
Protein sequence
MEVVVEILVV NPNSTQSMTD KIVEAARAVA SPGTVIHGAT AAGAPASIEG HYDEAMSLPG 
LMARVREAEA KGIDGIVVAC FDDPGIAACR ELASGPVLGI CEAAVKAASM LATSFSVVTT
LPRSVPVIEH LIHGYGLSHQ CRRVRSAAIP VLALEEPGSN ARIKVRDEIL CAIREDRCEA
VVLGCAGMAD LTAWLSEETG IPVIDGVSVA TRMIEALVGA GLKTSKINAY AFPNEK