Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0679 |
Symbol | |
ID | 4578749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 662118 |
End bp | 662828 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639767997 |
Product | Asp/Glu racemase |
Protein accession | YP_914487 |
Protein GI | 119383431 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0768431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.106443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGTAG TGGTGGAAAT CCTGGTCGTC AATCCGAACT CGACCCAGTC AATGACCGAC AAGATCGTCG AGGCCGCCCG CGCGGTCGCC AGCCCCGGGA CGGTGATCCA TGGCGCCACC GCCGCCGGTG CGCCCGCCAG CATCGAAGGG CATTACGACG AGGCGATGTC CCTGCCCGGC CTGATGGCGC GGGTCCGCGA GGCCGAGGCG AAGGGAATCG ACGGCATCGT CGTCGCCTGC TTCGACGATC CGGGCATCGC CGCCTGCCGC GAACTGGCCA GCGGCCCGGT GCTGGGCATC TGCGAGGCCG CGGTAAAGGC GGCCAGCATG CTGGCGACCT CGTTTTCCGT CGTGACCACG CTGCCGCGCT CGGTCCCGGT GATCGAGCAC CTGATCCACG GCTACGGCCT GTCGCATCAA TGCCGCCGCG TGCGCTCGGC GGCGATCCCG GTGCTGGCGC TGGAGGAGCC CGGCTCGAAC GCACGCATCA AGGTCCGCGA CGAAATCCTG TGCGCCATCC GCGAGGACCG CTGCGAAGCC GTGGTTCTGG GCTGCGCCGG CATGGCCGAC CTGACGGCCT GGCTCAGCGA GGAAACCGGC ATTCCCGTCA TCGACGGCGT CAGCGTCGCG ACCCGCATGA TCGAGGCGCT GGTGGGCGCG GGACTGAAGA CCAGCAAGAT CAACGCCTAC GCTTTCCCCA ACGAAAAATA G
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Protein sequence | MEVVVEILVV NPNSTQSMTD KIVEAARAVA SPGTVIHGAT AAGAPASIEG HYDEAMSLPG LMARVREAEA KGIDGIVVAC FDDPGIAACR ELASGPVLGI CEAAVKAASM LATSFSVVTT LPRSVPVIEH LIHGYGLSHQ CRRVRSAAIP VLALEEPGSN ARIKVRDEIL CAIREDRCEA VVLGCAGMAD LTAWLSEETG IPVIDGVSVA TRMIEALVGA GLKTSKINAY AFPNEK
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