| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0678 |
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| Symbol | |
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| ID | 4578748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 660737 |
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| End bp | 662089 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639767996 |
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| Product | permease for cytosine/purines, uracil, thiamine, allantoin |
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| Protein accession | YP_914486 |
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| Protein GI | 119383430 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.232179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0587875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTC ACGAGATGGC GCCCGACAGC GCCGTGATCG AACACAAGGC GGTCGGCGAG
GAAAGCCTGG CCCCGCAGGA AGCCCGCATC ATGGACCCCT GGTCCTACCT GTTCGCCTGG
CTGGGCGGAT GCGTCTCGAT CGGGACCTTC ACCGTCGGCT CGGGGCTGGT GGGAACGCTG
AACCTGCTTC AGACCTTCGT GGCCATTACC ATCGGCTGCA CCGTGATCGG CGTGGCGCTG
ATGATCAACG GGCAGGCGGG CCACAAGTAC GGCATCCCCT TCATGGTGCA GGCCAGATCC
TCTTTCGGCT TTACCGGGAC GCGAATCCCG GCGCTGGTGC GCTCGGTCCC GGCAATCGTC
TGGTTCGGCT TTCAAAGCTG GATCGGCGCA GGGGCGCTGA ACCTCGTGTC CGAAACCATG
TTCGGCTATT CCAATATCTG GGCGTTCTTC ATCGGCTTCC AGCTTTTGCA GATCGGCCTG
TCGGTGCTGG GCTTCCATGG CATCAAATGG CTGGAAAACA TCGGCGCGGT CTTCATCATC
GGCTCGCTGA TCTACATGTT CTTCAGCGTC ATCAATCGCT ATGGCGCCGA GATCAGCGCC
AATCTGATCA ATGCCGAAGG CACCTGGGGC GCACCCTTCT GGGGCGGCAC GATGCTGTTT
CTTGGCGTGT ATTCGACGAT GATGCTGAAC GTATCGGACT ATTCGCGCGA ATTGCAGCAT
CGCGTAGGGC GGATGCGGCA GGTGGTGATC TATGCCAACT CGATCCTGCC TGCGACGCTG
TTCATGGGCC TGATCGGGCT GATGGTGTCC AGCGCGACCG GCGAGGTCGA TCCGATCAAG
GTCTTTTCCA GCGCCGTGGA CAACAAGGTG CTGCTGGTCG TGACGCTGCT GTTCATCGCC
TTCGCGCAGG TGACGACGAA CATCCTCAAC AACGTCGTCC CGCCCGCCTA TGCGCTGATG
GACGTGTTCA AGATCAACTT CAAGACCTCG GCGGTGATCG TCGGCCTGCT GGCCTTCGTC
ACCTTCCCGT GGGAACTGGT CAAGGACGAA TCGGCGGCGG GCCTGAGCCT GTTCATCCGC
ACCTATTCCG CCTTCCTCGG CCCGATCTTC GCGATCCTGG TGGTGGATTA CTTCGTACTG
CGCAAGCAGC AACTGAACCT CGAAAAGCTC TATGATCCCG AAGGCCCCTA CAAGGGCGTC
AACATGGCCG CCGTCATCGC CATGGGCGTC GGGATCGTCT TCGCGCTGAT CTTCTCGGGC
ATCTCGTGGT ATGCAAGCCT GCTGCCCTCG GGGATCCTCT ATTATCTGCT GATGCAGCAC
CTGCCCTCGG CGCAGCGCTT CCGGGAGAAT TGA
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| Protein sequence | MTTHEMAPDS AVIEHKAVGE ESLAPQEARI MDPWSYLFAW LGGCVSIGTF TVGSGLVGTL
NLLQTFVAIT IGCTVIGVAL MINGQAGHKY GIPFMVQARS SFGFTGTRIP ALVRSVPAIV
WFGFQSWIGA GALNLVSETM FGYSNIWAFF IGFQLLQIGL SVLGFHGIKW LENIGAVFII
GSLIYMFFSV INRYGAEISA NLINAEGTWG APFWGGTMLF LGVYSTMMLN VSDYSRELQH
RVGRMRQVVI YANSILPATL FMGLIGLMVS SATGEVDPIK VFSSAVDNKV LLVVTLLFIA
FAQVTTNILN NVVPPAYALM DVFKINFKTS AVIVGLLAFV TFPWELVKDE SAAGLSLFIR
TYSAFLGPIF AILVVDYFVL RKQQLNLEKL YDPEGPYKGV NMAAVIAMGV GIVFALIFSG
ISWYASLLPS GILYYLLMQH LPSAQRFREN
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