| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0664 |
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| Symbol | |
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| ID | 4578969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 644849 |
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| End bp | 645850 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639767982 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_914472 |
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| Protein GI | 119383416 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.613063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA GGACATTGTT CGCGGCCTTT GCCATCGCCG CCTCTTTCGG CCAGGCCGCG
GCGGCGCAGG AGATGTCGTT CTTCCGCATC GGCACCGGCG GCACCGCCGG CACCTATTAC
CCGATCGGCG GGCTGATCGC GAATGCGATC TCGAACCCGC CCGGCTCGCG GGCCTGCGAG
GACGGCGGCT CTTGCGGCGT GCCGGGACTG GTGGCGACGG CCGTGGCCTC GAACGGCTCT
GTCGGCAACG TGAACGCCAT CAACGGCGGC GCCATGGAGG CAGGCTTCAG CCAGTCCGAC
GTGGCCTTTT GGGCACAGAC CGGCACCGGG CTGTGGGAAG GCCAGCCGGC GGTCGAGAAG
CTGCGCCTGA TCGCCAACCT CTATCCGGAA AGCATCCACC TGGTGGCGCG CAAGGACGCG
GGCATCGCCT CGGTCGCCGA TCTCAAGGGC AAGCGGGTCT CGCTGGACGA GCCGGGCTCG
GGCACGCTGG TCGATGCCAA GATCATCCTC GAAGCCTTCG GCCTGTCCGA ATCCGACGTC
ACGCCGGAAT ATCTCAAGCC CGACCAGGCG GCGGACCGGA TGCGCGACGG GGCGATGGAC
GCCTTCTTCT TCGTCGGCGG CTATCCTGCG GGCGCCATCG CCGAGCTGTC CAGCCAGCAT
GACGTGGTGC TGGTGCCGAT CACCGGCCCC GAGGTCGACA AGCTGCGCGA AACCTACAGC
TTCTTCGCCA CCGACACCGT TCCCGCCGGA ACCTATGAAG GGCAGGATGC CGACGTCGCC
ACGATCTCGG TCGGGGCGCA GCTGGTGACC AGCGCCGACC AGCCCGAGGA ACTGATCCAC
GGCATCACCC AGGCGCTCTA CAACGAGAAC ACGCAAAAGC TGTTCGCCGC CGGCCATGCC
AAGGGCAAGC TGATCACGCT GGAAAGCGCG ACCGAGGGCG CGGGCATCCC CTTCCATCCG
GGCGCCGAGC GTTTCTACAA GGAAGCCGGC AAGCTCGAGT GA
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| Protein sequence | MKLRTLFAAF AIAASFGQAA AAQEMSFFRI GTGGTAGTYY PIGGLIANAI SNPPGSRACE
DGGSCGVPGL VATAVASNGS VGNVNAINGG AMEAGFSQSD VAFWAQTGTG LWEGQPAVEK
LRLIANLYPE SIHLVARKDA GIASVADLKG KRVSLDEPGS GTLVDAKIIL EAFGLSESDV
TPEYLKPDQA ADRMRDGAMD AFFFVGGYPA GAIAELSSQH DVVLVPITGP EVDKLRETYS
FFATDTVPAG TYEGQDADVA TISVGAQLVT SADQPEELIH GITQALYNEN TQKLFAAGHA
KGKLITLESA TEGAGIPFHP GAERFYKEAG KLE
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