Gene Pden_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0613 
Symbol 
ID4578997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp589984 
End bp591234 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content66% 
IMG OID639767931 
Productmajor facilitator transporter 
Protein accessionYP_914421 
Protein GI119383365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0957759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.58484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACCG TGCTGCGCAC CACCTGGCCG TTGCTTCTGG GCATCCTGCT CTTGATGGTC 
GGGAACGGGA TGCAAGGCAC GCTCCTGGGC ATTCGCGGCA AGATCGAGGG CATATCGACC
ACCCAGATGT CGGTGGTCAT GTCGGCCTAT TTCGGCGGCT TCCTGCTGGG CTCGCGCGTG
GTGCCCGAAC TGATCCGCCA GGTCGGCCAT GTGCGGGTCT TCGCGGCGCT CGGCTCGCTG
ATCTCGTCGG TGCTGATCCT TTACGCGGCC GCGCCGCACT GGATCTCATG GTCGCTGATG
CGGCTCCTGA TCGGGTTCTG CTTCTCGGGG GTCTACATCA CCGCGGAAAG CTGGCTGAAC
GCCGGCACCA CCAACGAGAA CCGCGGCCAG GCCATGTCGG CCTACATGAT CATGCAGATG
CTGGGCATCA TTTCGGCCCA GTTCCTGATG AACACGGCCG ATCCGGCGGG CTATCTGCTG
TTCGTGATTC CCTCGGTGCT GGTCAGCGTC TCGTTCCTGC CGATCCTGCT TTCGACGCAG
CCCGCGCCGC AATTCGCGAC CCTGAAGCGC ATGAGCTTCG GCAGCCTGTT CCGCGTCTCG
CCGCTGGGCT GCATCGGCAT ATTCCTGATG GGCGGGGTGT TTTCGGCGCT GTTCGGCATG
GCCTCGGTCT GGGGCTCGAC CAAGGGGCTT TCGGTGCGAG AGATCTCGGC CTTCGTTGCC
GCGATCTATG CCGGCGGGCT CTTGCTGCAA TATCCGATCG GCTGGCTTTC GGACCATGGC
GACCGGCGCT TCATCGTGCT GGGGCTGTCG GTGCTGGGTG CTGCGGTCAG CCTGGCGACG
GTGACGCTGC AGCCGGACAT CTGGGGCCTG CTGCTGGCGG CGGCGCTGAT CGGCGGCGTG
GCCAATCCGG TCTATTCGCT GCTCTTGGCC TATACCAACG ACTTCCTGGA CAGCAGCGAC
ATGGCCGCCG CCTCGGCCGG GCTTCTGTTC ATCAATGGCG TGGGCGCCAT GGCCGGGCCG
TTGATCACCG GCTGGCTGAT GTCGCTGCTG GGGCCGGACG GGTTCTGGGT CTATATCGGC
CTGCTGCTGG CGGTGCTGGC CTTCTATGCC GGCTGGCGCC GCACCCGCCG CCCGGCCGCC
CCGGTGGCGG ATCAGCAAAG CTTTGCGGTC ATCGCCCCCT CGGCCACGCC CGTCGCGGTC
GAGGCGGCGC TGGAAACCGC CAGTTCCGAC GACGGCGACA AACCCGCCTG A
 
Protein sequence
MLTVLRTTWP LLLGILLLMV GNGMQGTLLG IRGKIEGIST TQMSVVMSAY FGGFLLGSRV 
VPELIRQVGH VRVFAALGSL ISSVLILYAA APHWISWSLM RLLIGFCFSG VYITAESWLN
AGTTNENRGQ AMSAYMIMQM LGIISAQFLM NTADPAGYLL FVIPSVLVSV SFLPILLSTQ
PAPQFATLKR MSFGSLFRVS PLGCIGIFLM GGVFSALFGM ASVWGSTKGL SVREISAFVA
AIYAGGLLLQ YPIGWLSDHG DRRFIVLGLS VLGAAVSLAT VTLQPDIWGL LLAAALIGGV
ANPVYSLLLA YTNDFLDSSD MAAASAGLLF INGVGAMAGP LITGWLMSLL GPDGFWVYIG
LLLAVLAFYA GWRRTRRPAA PVADQQSFAV IAPSATPVAV EAALETASSD DGDKPA