Gene Pden_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0603 
Symbol 
ID4579647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp578569 
End bp579861 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content66% 
IMG OID639767921 
Productadenylosuccinate synthetase 
Protein accessionYP_914411 
Protein GI119383355 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATG TGGTGGTCGT CGGCGCGCAA TGGGGCGACG AAGGCAAGGG CAAGATCGTC 
GACTGGCTGT CGGAACGCGC CGATGTGATC GCGCGCTTTC AGGGCGGTCA TAACGCTGGC
CACACGCTGG TCATTGGCAA TCAGGTGTTC AAGCTGTCGC TGCTGCCCTC GGGCATCGTG
CGCAAGGGCA AGATGGCGGT CATCGGCAAC GGCGTTGTGC TGGACCCCTG GTCCCTGTTT
GCCGAAATCG ACAAGCTTTC CGCGCAAGGG GTCGAGATCA GCCCGGCGAA CCTGATGATC
GCCGAGAACA CCCCGCTGAT CCTGCCGCTG CACCAGGATC TCGACAAGCT GCGCGAAGAG
GCCGCGGGCG CATCCAAGAT CGGCACCACC GGCCGCGGCA TCGGCCCGGC CTATGAGGAC
AAGGTCGGCC GCCGCACCAT CCGCGTCGCC GACCTGGGCG ATGAGGAGAC GCTGGATTCC
CGCCTCGACC GCCTGCTTGC CCATCACGAT GCGCTGCGTC AGGGCCTGGG TGCAGCGCCC
ATCGACCGGG CGGAACTGCG CGCCAAGCTG CTGGAAATCG CGCCGAAACT GCTGCAATAC
GCCCAGCCGG TCTGGAAGGT GATGAACGAC TACCGCAAGG CCGGCAAGCG CATCCTGTTC
GAGGGTGCGC AGGGCAGCCT GCTGGACATC GACTTCGGCA CCTACCCTTA CGTGACCAGC
TCGACCACCA TGTCGGGCAT GGCGGCCAGC GGCACCGGGC TTGGCCCTTC GGCCATCGGC
TTCGTGCTGG GGATCGTCAA GGCCTATACG ACCCGCGTCG GCGAAGGCCC GTTTCCCACC
GAGCTTGACG ATGCCGACGG CCAGCGCTTG GGTGAGCGCG GCCATGAATT CGGCACCGTG
ACCGGCCGCA AGCGCCGCTG CGGCTGGTTC GATGCGGTTC TGGTGCGCCA GACCTGCGCC
ATCTCGGGCG TGGACGGCAT TGCGCTGACC AAGCTGGACG TGCTGGACGG CTTCCAGACG
CTGAAGATCT GCACCGGCTA CGAGGTGGAC GGCCAGCATT ACGACCACCT GCCCACCGCC
GCCTCGCTTC AGGCCAAGGC GAAGCCCGTC TACGAGGAAA TGGAGGGCTG GCAGGAATCG
ACGCAAGGCG CGCGGTCCTG GGCCGACCTG CCCGCTAATG CGATCAAATA CGTCCGCCGC
ATCGAGGAAC TGATCCAGTG CCCCGTCGCG CTGCTCTCGA CCTCGCCCGA GCGGGACGAT
ACCATCCTCG TGACCGATCC CTTCGCGGAC TGA
 
Protein sequence
MANVVVVGAQ WGDEGKGKIV DWLSERADVI ARFQGGHNAG HTLVIGNQVF KLSLLPSGIV 
RKGKMAVIGN GVVLDPWSLF AEIDKLSAQG VEISPANLMI AENTPLILPL HQDLDKLREE
AAGASKIGTT GRGIGPAYED KVGRRTIRVA DLGDEETLDS RLDRLLAHHD ALRQGLGAAP
IDRAELRAKL LEIAPKLLQY AQPVWKVMND YRKAGKRILF EGAQGSLLDI DFGTYPYVTS
STTMSGMAAS GTGLGPSAIG FVLGIVKAYT TRVGEGPFPT ELDDADGQRL GERGHEFGTV
TGRKRRCGWF DAVLVRQTCA ISGVDGIALT KLDVLDGFQT LKICTGYEVD GQHYDHLPTA
ASLQAKAKPV YEEMEGWQES TQGARSWADL PANAIKYVRR IEELIQCPVA LLSTSPERDD
TILVTDPFAD