Gene Pden_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0597 
SymbolrecA 
ID4579641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp572452 
End bp573522 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content62% 
IMG OID639767915 
Productrecombinase A 
Protein accessionYP_914405 
Protein GI119383349 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.408398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGGG CAACACTTTT CGACATGAAC GACAAGCGAT CCGCAGACAA GCAGAAGGCG 
CTAGACAGCG CATTGGCCCA GATCGAACGG CAGTTCGGCA AAGGCTCGAT CATGAAGCTG
GGCGCCGACA ATCCGGTGGC CGAGATCGAG GCCACCTCGA CCGGCTCGCT GGGGCTCGAC
ATCGCGCTGG GGATCGGCGG TCTGCCCAAG GGCCGGATCA TCGAGATATT CGGGCCGGAA
AGCTCGGGCA AGACCACGCT GACGCTGCAT GTCGTGGCGG AAGAGCAGAA GAAAGGCGGC
GTTTGCGCCT TTGTCGATGC CGAACATGCG CTGGACCCGC AATATGCCAA GAAGCTGGGC
GTCAATCTGG ACGAGTTGCT GATCAGCCAG CCCGATACGG GCGAGCAGGC GCTTGAGATT
GTCGATACGC TGGTGCGTTC CGGTGCGGTC AGCCTGGTGG TGGTCGATTC GGTCGCGGCG
CTGACCCCCA AGTCCGAGAT CGAAGGTGAC ATGGGCGACA TGCAGATGGG CAGCCAGGCC
CGGCTGATGA GCCAGGCGAT GCGCAAGCTG ACCGCCAGCA TCGGCCGGTC GAACTGTATG
GTGATCTTCA TCAACCAGAT CCGCATGAAG ATCGGCGTGA TGTTCGGAAG CCCAGAGACG
ACGACCGGCG GCAATGCCCT GAAGTTTTAT GCCTCGGTGC GCCTGGATAT CCGCCGCGCC
GGCTCGATCA AGGACCGTGA CGAGGTGACC GGCAACGCCA CTCGCGTCAA GGTGGTCAAG
AACAAGGTCG CGCCACCTTT CCGTCAGGTC GAGTTCGACA TCATGTATGG CGAGGGCATC
TCGAAGGTCG GCGAACTGAT CGACTTGGGC ATCAAGGCCG GCGTGGTCGA AAAATCGGGG
TCGTGGTACT CCTATGGCGA CGAGCGCATC GGCCAGGGCC GTGAGAATGC CAAGCAATTC
CTGCGCGATC ATCCCGATAT GGCCCATGCG ATCGAGGACA AGATCCGCGC CAGCCACGGC
CTGGATTTCG GCGTCGCGGA CGATGGCGAT GAGGTGATGG CCGAGGATTG A
 
Protein sequence
MAGATLFDMN DKRSADKQKA LDSALAQIER QFGKGSIMKL GADNPVAEIE ATSTGSLGLD 
IALGIGGLPK GRIIEIFGPE SSGKTTLTLH VVAEEQKKGG VCAFVDAEHA LDPQYAKKLG
VNLDELLISQ PDTGEQALEI VDTLVRSGAV SLVVVDSVAA LTPKSEIEGD MGDMQMGSQA
RLMSQAMRKL TASIGRSNCM VIFINQIRMK IGVMFGSPET TTGGNALKFY ASVRLDIRRA
GSIKDRDEVT GNATRVKVVK NKVAPPFRQV EFDIMYGEGI SKVGELIDLG IKAGVVEKSG
SWYSYGDERI GQGRENAKQF LRDHPDMAHA IEDKIRASHG LDFGVADDGD EVMAED