Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0563 |
Symbol | |
ID | 4579684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 538156 |
End bp | 538995 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639767881 |
Product | Citryl-CoA lyase |
Protein accession | YP_914371 |
Protein GI | 119383315 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.293195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTC CCTATCGTTC CGTCCTCTAC ATTCCGGCCG CCAATGCGCG GGCCATGGAA AAGGCCCAGA CGCTGGCCGC CGATGCGATC ATCTTCGACC TCGAGGACGC CGTGGCGCCT GCCGAGAAGG TGGGCGCACG GGAATTGCTG GCCCGGGCCT TGCAGGCGGA TTACGGCGGC CGGGCGCGGA TCGTGCGCAT CAACGGCATG GACACCGAAT GGGGCGAGGG CGATGCCCGC ACCTTTGCCG CCGGCGCCGA TGCGGTGCTG GTGCCCAAGG TCAGCCGCGG CGCCGATCTT GACCGCGTGG CGGCGCTGGT GCCCGACACG CCGCTCTGGG CGATGATGGA GACGGCCGAG GGCATGCTGA ACGCCGCCGA GATCGCCGCC CATCCGCGCT TGCAGGGCAT GGTGATGGGC ACCAATGATC TGGCCAAGGA ACTGAACTCG CGGTTTCGCG CCGACCGGCT GCCGATGATG GCGGGTCTGG GCCTGTGCCT GCTGGCCGCG CGGGCGCATG GCCGCGTCAT CGTGGACGGC GTCTTCAACG CCTTCAAGGA CGAAGAGGGC CTGCGCGCCG AATGCGAACA GGGCCGCGAC ATGGGCTTCG ACGGCAAGAC CCTGATCCAT CCGGCGCAAC TGGCCGTCGC CAACGAGGTC TTTGCGCCCT CCGAGGCCGA GGTCGATCTC GCCCGCCGCC AGATCGAGGC CTTCGACGAG GCGCAGGCCC AGGGCAAGGG CGTCGCCGTG GTGGATGGCA GGATCGTCGA GAACCTGCAT GTCGAGACCG CCCGCGCCAC GCTGGCCAAG GCGGCAGCGA TTGCCGAACT CGCGGGGTGA
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Protein sequence | MTRPYRSVLY IPAANARAME KAQTLAADAI IFDLEDAVAP AEKVGARELL ARALQADYGG RARIVRINGM DTEWGEGDAR TFAAGADAVL VPKVSRGADL DRVAALVPDT PLWAMMETAE GMLNAAEIAA HPRLQGMVMG TNDLAKELNS RFRADRLPMM AGLGLCLLAA RAHGRVIVDG VFNAFKDEEG LRAECEQGRD MGFDGKTLIH PAQLAVANEV FAPSEAEVDL ARRQIEAFDE AQAQGKGVAV VDGRIVENLH VETARATLAK AAAIAELAG
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