Gene Pden_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0551 
Symbol 
ID4579789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp523200 
End bp524594 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content66% 
IMG OID639767869 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_914359 
Protein GI119383303 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCT ATGACCTGAT CGTGATCGGC GCCGGTCCCG GCGGCTATGT CTGTGCGATC 
CGCGCCGCCC AGCTGGGCCT GAAGGTCGCC TGCGTCGAGG GACGCGAAAC ACTGGGCGGA
ACCTGCCTGA ACGTCGGCTG CATCCCCTCC AAGGCGCTGC TGCATGCCAG CCACATGCTG
CACGAAACCC ACGAGAACTT TGAAAAGATG GGCCTGATGG GCGCCAAGCC CAAGGTCGAT
TGGGGCAAGA TGCAGGGCTA CAAGGCCGAG ACGGTCGGCG GCAACACCAA GGGCATCGAG
TTCCTGTTCA AGAAGAACAA GATCGACTGG CTCAAGGGCT GGGCCAGCAT CGAGGCGCCC
GGCAAGGTCA AGGTCGGCGA CACCACCCAT GAGACGAAGA ACATCGTCAT CGCCACCGGC
TCGGAGCCGG CCAGCCTGAA GGGGGTCGAG GTCGACAACG ACGCCGGCAT CGTCGTCGAT
TCGACCGGCG CGCTGTCCCT GCCGAAGATC CCCAAGTCGA TGGTGGTGAT CGGCGCCGGG
GTGATCGGGC TGGAGCTGGG CTCGGCCTAT GCCCGGCTCG GCGCCGAGGT GACGGTGGTC
GAGTTCCTCG ACGCCATCAC CCCCGGCATG GACGGCGAGG TGCAAAAGCA GTTCCAGCGG
ATCCTGGCGA AACAGGGGCT GAAATTCGTC CTCGGCGCCG CCGTGTCCGG GGTCGAGGTC
GAAAAGGGCA AGGCCGAGGT CAAGTACAAG CTGCGCAAGG ACGACAGCGA GCATGAGATC
AAGGCCGAAT GCGTGCTGGT CGCGACCGGC CGCCGCCCCT ATGTCGCGGG GCTGGGGCTC
GACAAGGTCG GCGTCGCGCT GACCGACCGC GGCTTCGTCC AGATCGACGA TCATTGGCAG
ACCAGCGTCA AGGGCATCTA TGCCATCGGC GACGCGGTGC CCGGCCCGAT GCTGGCCCAC
AAGGCCGAGG ACGAGGGCAT GGCGGTCGCC GAGGTCATCG CCGGCAAGCA TGGCCATGTG
AACTACGACG TCATTCCCGG CGTGATCTAC ACCACACCCG AGGTCGCCTC GGTCGGCCTG
ACCGAAGAGG CCGCAAAGGA AAGCGGCCGC AAGATCAAGG TCGGCAAATT CCCCTTCATG
GGCAATGCCC GCGCCAAGGC GCTGTTCCAG GCCGAAGGCT TCGTCAAGAT GATCGCCGAT
GCCGAGACCG ACCGGGTCCT GGGCTGCCAC ATCATCGGCC CGAACGCCGG CGAGATGATC
CACGAGGTCT GCGTGGCGAT GGAATTCGGT GCCTCGGCCC AGGACATCGC GCTGACCTGC
CATGCGCATC CGACCTGCTC GGAGGCGGTG CGCGAGGCGG CGCTGGCCTG CGGCGACGGC
GCGATTCACG CCTGA
 
Protein sequence
MSTYDLIVIG AGPGGYVCAI RAAQLGLKVA CVEGRETLGG TCLNVGCIPS KALLHASHML 
HETHENFEKM GLMGAKPKVD WGKMQGYKAE TVGGNTKGIE FLFKKNKIDW LKGWASIEAP
GKVKVGDTTH ETKNIVIATG SEPASLKGVE VDNDAGIVVD STGALSLPKI PKSMVVIGAG
VIGLELGSAY ARLGAEVTVV EFLDAITPGM DGEVQKQFQR ILAKQGLKFV LGAAVSGVEV
EKGKAEVKYK LRKDDSEHEI KAECVLVATG RRPYVAGLGL DKVGVALTDR GFVQIDDHWQ
TSVKGIYAIG DAVPGPMLAH KAEDEGMAVA EVIAGKHGHV NYDVIPGVIY TTPEVASVGL
TEEAAKESGR KIKVGKFPFM GNARAKALFQ AEGFVKMIAD AETDRVLGCH IIGPNAGEMI
HEVCVAMEFG ASAQDIALTC HAHPTCSEAV REAALACGDG AIHA