Gene Pden_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0443 
Symbol 
ID4578846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp412240 
End bp412752 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content54% 
IMG OID639767761 
Producthypothetical protein 
Protein accessionYP_914253 
Protein GI119383197 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.151743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAC GTGAGTACAA TCGAATTGAA GGGCCTGCCA AGAAAATCCT TGAACGGTAT 
CTTGCAGAAT ACCCTGTAAA GCTCGGGCAA CTCGCAAAGG AGCTGGGCGT TTCTATCAAG
GTGTCCAGCA TGAGCACTGG TGTTTCCGGT CAAATCATGA AGGAAGATGG GAACTACACC
ATTCGCGTGA ACCGGCATGA GGCGCGTGAG CGCCAGAGGT TCACCATCGC ACATGAGCTG
TCCCATTTCT TCCTGCACAA GGCGGTCATT GACAGCTCGC CGGACGGGAT CAAGGATAAC
GTCCTGTATC GCTCCGGGGA GCCGGAGCGC ATTGAGTATG AAGCCAATCG TCTGGCGGCG
GACATTGTTA TGCCGATGGC GCTTGTCGAA CAGGTGCTTC GTGACGAATT TGGCGGCGTA
GTCACAGAGG CCACGATAGA AAGCCTTGCG GCGCGGTTCC AAGTGTCCAA AGCTGCCATG
GAAATCCGGT TGTCGACCTT CGCAGAAGCA TGA
 
Protein sequence
MTSREYNRIE GPAKKILERY LAEYPVKLGQ LAKELGVSIK VSSMSTGVSG QIMKEDGNYT 
IRVNRHEARE RQRFTIAHEL SHFFLHKAVI DSSPDGIKDN VLYRSGEPER IEYEANRLAA
DIVMPMALVE QVLRDEFGGV VTEATIESLA ARFQVSKAAM EIRLSTFAEA