| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0395 |
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| Symbol | |
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| ID | 4579577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 365115 |
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| End bp | 365942 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639767712 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_914205 |
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| Protein GI | 119383149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.47994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.932135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACC AGCAAAACCT CGGCCAGAGC ATTCCTCTGC CCTTCATGAA GATGCACGGG
CTCGGCAACG ACTTCGTGGT GATCGACAGC CGCCGGACCG GCGCGCTGCC CGATGCCGCG
ACCGTGGCCG CCATCGCCGA CCGCCATCGC GGCGTCGGCT TCGACCAGCT GGCCGTCATC
CTGCCCGGCG AGAATGCCGA TGCGCGGCTG GTGTTCTTCA ACGCGGACGG CTCGCTTTCG
GCGGCCTGCG GCAATGCCAC GCGCTGCGTC GCCCGCTTTC TCATGGACGA AACGGGCGCC
CGCGCGCTGC GGCTCGCCAC CGATCACGCG GTGCTTGCGG CCGAGGATGC CGGGGACCGG
CTGACGCGGG TCAACATGGG CGCGCCGGTG CTGGACTGGG CCGGGATTCC GCTGGCCGAG
GATGTCGATA CGCTGCACCT GCCCGTTCCG GGCGATCCGG TGGCGACGGG CATGGGCAAT
CCGCATATGA CCTTCTTCGT GCCCGATGCG GCGGCGGTGG ACCTGGAACG CTTCGGCCCC
GCGCATGAGC ATCATCCGCT TTATCCGCAG CGGACGAATA TCGAGCTGGT GCAGGTCGTT
TCGCCGGACG AGATCATCCT GCGCATCTGG GAACGCGGCA CCGGCATCAC CCTGGCCTCG
GGGTCGTGCT CCTGCGCGGC GGTGGTGGCG GCGGCGCGGC GCGGGCTGAC CGGGCGGCGG
GTCAGGGTCA ACGTGCCCGG CGGCGTGCTG GAGATCGACT GGCGCGAGGA CGGGGTCTGG
ATGACCGGGC CGACCGCGCA TGTCTTCGAC GGGGTCTGGC GGGGATGA
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| Protein sequence | MEHQQNLGQS IPLPFMKMHG LGNDFVVIDS RRTGALPDAA TVAAIADRHR GVGFDQLAVI
LPGENADARL VFFNADGSLS AACGNATRCV ARFLMDETGA RALRLATDHA VLAAEDAGDR
LTRVNMGAPV LDWAGIPLAE DVDTLHLPVP GDPVATGMGN PHMTFFVPDA AAVDLERFGP
AHEHHPLYPQ RTNIELVQVV SPDEIILRIW ERGTGITLAS GSCSCAAVVA AARRGLTGRR
VRVNVPGGVL EIDWREDGVW MTGPTAHVFD GVWRG
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