Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0362 |
Symbol | |
ID | 4580519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 340714 |
End bp | 342063 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639767677 |
Product | HK97 family phage major capsid protein |
Protein accession | YP_914172 |
Protein GI | 119383116 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGG CACTCATGCC GCAGGCCTCC CTTGCGGCCC TGATGGCTGC GCGTCCGCAG GCCGTGATCG GCGCCGTGCG CAGCGAGGCC AACCCGGGCA ATGTCGAGCA GCTGATGCGC GAGGTTCGCC AGGAACTGGA TCGGATCGGC GGCGACGTGA AGCGCACCGC CGAGGACGCG CTGCGCCAGT CGCGCGATAC CGGCGAGCTG ACCCGCGAGT TGAAGAACTC GGCCGACCAG CTGCTGACCC AGCAGAAGAT CCTGACGGAC GCCCAGCAGA AGCTGACCGA CCGTCTGGAG CAGCTGGAGA CGCGCAACAC CGATCTGGAA CAGCAGCTTT CGCAGCGTGG TCGCGGCAAC CGCGATCAGG TCCAGAGCTT CGGCGAGCGC GCGGCCAGGC ATGACGACAT GCGCGCCTTT GCGCAGGCCG GCTGCAAGGG CACCGTCCGC ATCGCGCTCG ATGTCGAGCA GGCGATCACC TCGGTGCGTC CGGGCGGCGG CGGGCTGATC TGGTCGGATC GCGAGACCGA GATCGTCGGC CTGCCGCGCC GGCAGATGAC GATCCGCAAC CTGCTTTCGC AGGGCCGCAC CGGATCGAAC GCCATCGAAT ATGCGCGCCA GACCACGCGG ACCAACAATG CCCGTCCGGT CACCGAAGGC GCGCAGAAGC CCGAGTCGGA CTATGTCTGG GCGCAGGAAA GCGCGCTGGT GCGCACCATC GCGCATTTCG TGCATGTGTC GCGCCAGGCG ATGGAGGATG CCCAGCAGCT CCAGACCGAG ATCGATACGG AACTGCGCTA CGGCCTGATG CTGGCCGAAG AGGGGCAGCT GCTGAAGGGC GACGGCGTCG GCCAGAACCT GGAAGGGCTT GTCACGGCCG CCACCGCCTT CGTCCCGGCC TTCGCGGTCG CGGGCGAGAC GATGATCGAC ACGCTGCGCC TGGCGCTCCT GCAAGCGTCG CTGGCCGAGT ATCCGGCCGA CGGCATCGTG CTGCATCCGA CGAACTGGGC GCAGATCGAA CTGACCAAGG ATGGCGAGTT CCGCTATATC TTCGCCAACG TCATGCAGCT GGCCGGCCCG CAGCTCTGGG GCCATCCCGT GGTGCAGACC CAGTCCATGG ATCTCGATGA GTTCCTGACC GGCGCCTTCA AGGCCGCGGC GACGATCTAC GACCGCATGG ACCCCGAGGT CATCGCCTCC AGCGAGGATC GTGACAACTT CATCAAGAAC ATGATCACGG TCCGCGCCGA GGAGCGGCTG GCGCTCGCGA TCAAGCGCCC GGCCGCGCTG ATCACCGGCG AGTTCAACTC GACGGTGGTT TCCAGCGGCG CGCCGGTCTC CAGCGCCTGA
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Protein sequence | MNKALMPQAS LAALMAARPQ AVIGAVRSEA NPGNVEQLMR EVRQELDRIG GDVKRTAEDA LRQSRDTGEL TRELKNSADQ LLTQQKILTD AQQKLTDRLE QLETRNTDLE QQLSQRGRGN RDQVQSFGER AARHDDMRAF AQAGCKGTVR IALDVEQAIT SVRPGGGGLI WSDRETEIVG LPRRQMTIRN LLSQGRTGSN AIEYARQTTR TNNARPVTEG AQKPESDYVW AQESALVRTI AHFVHVSRQA MEDAQQLQTE IDTELRYGLM LAEEGQLLKG DGVGQNLEGL VTAATAFVPA FAVAGETMID TLRLALLQAS LAEYPADGIV LHPTNWAQIE LTKDGEFRYI FANVMQLAGP QLWGHPVVQT QSMDLDEFLT GAFKAAATIY DRMDPEVIAS SEDRDNFIKN MITVRAEERL ALAIKRPAAL ITGEFNSTVV SSGAPVSSA
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