| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0333 |
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| Symbol | trpA |
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| ID | 4578814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 315957 |
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| End bp | 316754 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639767648 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_914143 |
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| Protein GI | 119383087 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.220131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAA TCGACGACAC TTTCGCGCGG CTGTCCGAGA CGGGCGGCAA GGCCTTCGTC
GCCTATATGA TGGGCTGCGA CCCGGATTTC GACACCTCGC TGCAGATCAT GCGCGGCCTG
CCCGGCGCGG GCGTGGACAT CATCGAACTG GGCATGCCCT TCACCGACCC GATGGCCGAC
GGCGCCACCA TCCAGGCGGC GGGCCAGCGC GCGCTGGCGG CCGGCGGCAG CGTCAGCAGG
GTGCTGGACA TGGTGCGCGC CTTTCGCCGG GACGACGATG CCACCCCCAT CGTGCTGATG
GGCTATTACA ACCCGATCTA TGCCCGGCAG GGCGGCGTGG ACCGCTTCAT CACCGAGGCG
GTCGAGGCCG GCGTGGACGG GCTGATCGTC GTCGACCTGC CGCCCGAAGA GGATGCCGAG
CTGTGCCTGC CGGCACGCGA GGCCGGGCTG AACTTCATCC GCCTGGCAAC GCCGACGACC
GACGACCGGC GCCTGCCTGC GGTGGTGCGC AATACCAGCG GCTTCGTCTA TTACGTCTCG
GTCACCGGCA TCACCGGCGG GCCCGCAGCC AATGCCGCAG AGGTCGCGCC AGAGGTCGCC
CGCATCCGCG CCGCCGCCAA GCTGCCGGTC GTCGTCGGCT TCGGCATATC GACGCCGGAG
GCAGCGCAGG CCGTGGCGGG CGTCGCCGAT GGCTGCGTCG TGGGCAGTGC CATCGTCAAG
CTGATCGGCG AGGGCCGCCC GGTGCCCGAG ATCCTGTCCT TCGTCGCAGA CCTGGCCCAG
GGCGCGCACA GCGCCTGA
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| Protein sequence | MSRIDDTFAR LSETGGKAFV AYMMGCDPDF DTSLQIMRGL PGAGVDIIEL GMPFTDPMAD
GATIQAAGQR ALAAGGSVSR VLDMVRAFRR DDDATPIVLM GYYNPIYARQ GGVDRFITEA
VEAGVDGLIV VDLPPEEDAE LCLPAREAGL NFIRLATPTT DDRRLPAVVR NTSGFVYYVS
VTGITGGPAA NAAEVAPEVA RIRAAAKLPV VVGFGISTPE AAQAVAGVAD GCVVGSAIVK
LIGEGRPVPE ILSFVADLAQ GAHSA
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