Gene Pden_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0318 
Symbol 
ID4578799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp300271 
End bp300927 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content70% 
IMG OID639767633 
ProductGntR family transcriptional regulator 
Protein accessionYP_914128 
Protein GI119383072 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAG CACGCGAACC CGCCCCCAGC CTTGCCGAAG AGATCGCCGC CCGGCTGCGC 
GACCAGGTCA CCGGCGGCGC GCTGGTGCCC GGCCAGCGGC TGTCCGAGGC GCGGGTCGCA
GCCGAACTCG ACATCTCGCG CAACACGCTG CGCGAGGTGT TCCGCCTGCT CACGCGCGAG
GGCATCCTGC GGCACGAGCC GAACCGGGGC GTCTTCGTCG CCGTGCCCTC GATGGCCTCG
ATCCTGGATA TCTATCGGGT GCGCCGGTTG ATCGAGGTGC CGGCGCTGGC CCAGGCATGG
CCCGGCCATG CCGCTGTCGC CCGCATGCGC TCCGCCGTCG CGCGGGCCAC GGAATTGCAG
CGCATCCCCG ACTGGCGCGG TGTCGGCAGC GCCAACATGG AATTTCACGC CGCCATCGTG
GCGCTGACCG ACAGCCCGCG GCTGATCCAG TTCTTTACCC AGATCATCGC AGAGTTGCGG
CTGGCCTTCG GCCTGCTCGA CAGTCCCGAA CTGCTGCACC GGCCCTATAT CCCGCGCAAT
GCCGAAATTC TGGGCAGGCT GGAGGCCGGC GACCCGGCCG GCGCCTCTCG CATGCTGGAG
GACTACCTGA ACCAGTCCGA GCGCGCCGTG CTGGAAGCCT TTGCCCGGCT GGGCTGA
 
Protein sequence
MAEAREPAPS LAEEIAARLR DQVTGGALVP GQRLSEARVA AELDISRNTL REVFRLLTRE 
GILRHEPNRG VFVAVPSMAS ILDIYRVRRL IEVPALAQAW PGHAAVARMR SAVARATELQ
RIPDWRGVGS ANMEFHAAIV ALTDSPRLIQ FFTQIIAELR LAFGLLDSPE LLHRPYIPRN
AEILGRLEAG DPAGASRMLE DYLNQSERAV LEAFARLG