| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0300 |
|---|
| Symbol | |
|---|
| ID | 4579696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 280913 |
|---|
| End bp | 281818 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639767615 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_914110 |
|---|
| Protein GI | 119383054 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4607] ABC-type enterochelin transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTCA AATTGATCGC TTGGGCCGCA ACGGCGCTGA CGCTGGCGGG CCCGGCGCTG
GCCGAGCCGA TGACCATCGC CCATTCCCAA GGCGAGACGG TGTTGCCGGC ACCGCCCTCC
AAGGTGCTGG TCCTGGACAT CAACGCGCTG GACATCGCCC ATGCCATGGG GGCCGAGCCT
GCCGGGGTGC TGGGCAGCAA CCTGCCGGAT TACCTGCAGG AATACGCCGC CGACCGGCCG
AAGATGGGCA CGATCTTCGA GCCGGACTAC GAATCCATCG CCGCCTCGGG CGCCGATCTG
ATGATCGTCG GCACCCGCAC CGCACCAGCC TATGCAGAGA TGTCCCGGAT CCTGCCGACG
GTCGACCTGA GCCTTGGCGA CGACCTGTTC GCTTCGGTCA GGGAAAATGT CGAGACGGTC
GGCCGGATCT TCGGCAAGCC CGCAAAGGCG GCCGAGATGG TCGCGGCGCT GGACGCCAAG
ATCGCGCATC TGAAAGATAT CGCCCCCGGT GCCGGGACCG CGCTGATCCT GGTCACCAAC
GGCGGCAAGC TGGGCGCCTA TGGGCCGAAA TCGCGGGTGG GCTGGGTCCA TACCCAACTG
GGCTTCGCCA CCGTCGCGCC GGATATCGAC GACCGTTTCC ACGGCGGCGA CGTGATCTCG
TTCGAATACA TCCTGGAGCG CGACCCCGAC TGGATCTTCG TCATCGACCG CGATGCCGGC
GTGGGCGAGG CGGGCGCGGG TGCCCGCGCC GCACTGGACA ATCCGCTGAT GGCGCGGACC
CAGGCGGTGC GGAACGGGCA TGTCGTCCAT CTGGACCCCC ATGCCGCCTA TATCGCCTTT
GGCGGCTATA CCGCGCTGAA CCGGCTGCTG GACCAGTTGA CCGAGGCGCT GGCCGCGACG
TCCTGA
|
|---|
| Protein sequence | MFVKLIAWAA TALTLAGPAL AEPMTIAHSQ GETVLPAPPS KVLVLDINAL DIAHAMGAEP
AGVLGSNLPD YLQEYAADRP KMGTIFEPDY ESIAASGADL MIVGTRTAPA YAEMSRILPT
VDLSLGDDLF ASVRENVETV GRIFGKPAKA AEMVAALDAK IAHLKDIAPG AGTALILVTN
GGKLGAYGPK SRVGWVHTQL GFATVAPDID DRFHGGDVIS FEYILERDPD WIFVIDRDAG
VGEAGAGARA ALDNPLMART QAVRNGHVVH LDPHAAYIAF GGYTALNRLL DQLTEALAAT
S
|
|---|
| |