Gene Pden_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0292 
Symbol 
ID4580197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp271049 
End bp272245 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content70% 
IMG OID639767607 
Producthypothetical protein 
Protein accessionYP_914102 
Protein GI119383046 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC CCCTGCTGAC GAACCGCGAT GCCCGCCGGT TGTTTCTGGA CCGGCACTTG 
CTGCTGCGCC CCGGCGCGGG TCCGGGCAAG GGCGCGGATC TGGAGAATGT GCTGTCCGGC
CTTGGCTTCG TGCAGGTGGA CAGCGTGAAC ACGCTGGCCC GCGCGCATGA CCTGATCCTG
TGGTCGCGGC GCGGGCAATA CCGCCCGCAG GGGCTGGAGA GCCTGATCGC CCGCCACCGC
GCCGGTTTCG AGCATTGGAC CCATGACGCC GCCGTCATCC CGATGCGCTT TTACCCGATG
TGGCGGCTGA AATTCGCCCG GGACGAGGCG CATATGCAGC GCCGCTGGCC GAAATGGCGG
CGCGAGGGCT GGGATGCGGA ATTCGACAGC GTGCTGCGGC ACATCGCCGA TCACGGCCCG
GCCAGTTCGT CGGATCTGGG CGGCGACGAG CCCAAGGGCT CTGGCGGCTG GTGGGACTGG
CACCCGTCCA AGACCGCGCT GGAATACCTG TGGCGCTCGG GCCGGCTGGC GATCTGCCAT
CGCTCGGGCT TTCGCAAGGT CTATGACCTG GCCGAGCGGG TGATCCCGGC CGAGCACCTG
AATGCACGGC TGGACGACGC CGAGATCATC GACTGGGCCA TGACGGCGGC GCTGGAGCGG
CTGGGCTTCG CCACCAGCGG CGAATTGGCC GGTTTCTTCG CCATCGCCAG CCGCGACGAG
GCGAAGCTGT GGTGCAGCGA GGCGCTGGCG GCGGGCCGGA TCGTGGAAAT CGACGTGGAA
ATGGCCGATG GCTCGGTGCG GCGCAGCTTC TCGGCCCCGG CGCTGCTGGA CCTGGTCCCC
GCGCTGCCCG ATCCGTCCTC GCGCATCCGC CTGCTCTCGC CCTTCGATCC GGCCTTGCGC
GACCGGGCGC GGGCCGAGCG GCTGTTCGGT TTCCGCTATC GCATCGAGAT CTTCGTGCCC
GCCGAGCGGC GGCAATACGG CTATTACGTC TTTCCGGTCA TGCAGGGCGA CCGGCTGGTC
GGGCGGGTGG ATACCAAGCG CGAGGATGGC GCGCTGGCCG TCCGCGCCTT CTGGCCCGAG
CCGGGGGTGC GCATGGGCCA GGGCCGCGTT ACAGCACTGG CGGCCGAGTT CCAGCGCATC
GCGCCGCTGG CCGGGGTGGA CGAGATCCGC CATGCGCCGG ACTGGCTGCG GGCCTGA
 
Protein sequence
MARPLLTNRD ARRLFLDRHL LLRPGAGPGK GADLENVLSG LGFVQVDSVN TLARAHDLIL 
WSRRGQYRPQ GLESLIARHR AGFEHWTHDA AVIPMRFYPM WRLKFARDEA HMQRRWPKWR
REGWDAEFDS VLRHIADHGP ASSSDLGGDE PKGSGGWWDW HPSKTALEYL WRSGRLAICH
RSGFRKVYDL AERVIPAEHL NARLDDAEII DWAMTAALER LGFATSGELA GFFAIASRDE
AKLWCSEALA AGRIVEIDVE MADGSVRRSF SAPALLDLVP ALPDPSSRIR LLSPFDPALR
DRARAERLFG FRYRIEIFVP AERRQYGYYV FPVMQGDRLV GRVDTKREDG ALAVRAFWPE
PGVRMGQGRV TALAAEFQRI APLAGVDEIR HAPDWLRA