Gene Pden_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0162 
Symbol 
ID4579716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp146505 
End bp147182 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID639767480 
ProductMltA-interacting MipA family protein 
Protein accessionYP_913975 
Protein GI119382919 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGG ATCGCATGAT CTTCGGCCTG GGGGCCGCCA GTGCCCCGGA ATACCAGGGC 
TCGGACCAGC AGAGCGCGCG CGCGATCCCG TTGATCGACA TTGCCCGCGG GCCGTTCTTC
ATGAACCTGC GCAACGGCAT CGGCGCCTAC CCGCTTGAAT ATGGCGACTT CCGGTTCGGA
ACCAGCATCG TCTATATTCC GGGCTTCGAC CTTCCCCATG CGCTCGGGGA GGTCTCGGGC
AGCGCTGGCG CCCGCCTGTT CACCGACTGG GAGCGGGGCG GCGTCAATGC CACCTTCGGC
GTGACCAGGG CCGTATCGGG CGATCTCGAA GGCACGCTTG TCGATGCGAG CCTGTCCTAC
CGCCACAATG TCACCCCGAA GTTGACGCTC ATCCCCGTCA TCGGCACCAC CTGGTCGGAC
AGCGACTACA CCAACAGCTA TTTCGGCGTC ACGCCGGCCC AGGCGGCGGC GGCCGGCATC
TCGTCCTTCT CGCCGGGCGG CGGGTTCAAG GATGTCTCGA TCGGCCTGAC CGCGAACTAT
CGGGTGACCG AGCGCGTGAA CCTGACGGCT TCGGCCACGA TGTCGAAGCT TCTTGGCGAC
GCCAAGGACA GCCCGATCGT CTTCGACGAC ACCCAGGCCT TCGGCTTCAT CGGGGTCTCG
TACCGCTTCG GCAACTGA
 
Protein sequence
MAQDRMIFGL GAASAPEYQG SDQQSARAIP LIDIARGPFF MNLRNGIGAY PLEYGDFRFG 
TSIVYIPGFD LPHALGEVSG SAGARLFTDW ERGGVNATFG VTRAVSGDLE GTLVDASLSY
RHNVTPKLTL IPVIGTTWSD SDYTNSYFGV TPAQAAAAGI SSFSPGGGFK DVSIGLTANY
RVTERVNLTA SATMSKLLGD AKDSPIVFDD TQAFGFIGVS YRFGN