| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0147 |
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| Symbol | |
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| ID | 4580171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 130604 |
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| End bp | 131779 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639767465 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_913960 |
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| Protein GI | 119382904 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA GGGAAGCTGC CGCCGCGCCG ATGCGCCTGC GGGCCGAGCC GCCGCGCGTC
ACCCGGCTGT CGCGCAAGGT GCTGGCGGGC CTCGGTGGGA TCGCCGCACT CGGCATCGGG
GCGGCGCTGA TCTTTGCCCT GCAAACCCGC GACGTCGAGC GCGGCGGCGA GGAGCTGTTC
TCCACCGAGA ACCGTACCAC CGCCGACGGG CTGGCGGAAC TGCCGCGCGA CTATAGCGGT
CCCGTCCTCG GCCCGGCGCT GCCCGGCGAT CTCGGCAAGC CGATCCTCAA CGCCCGGAAC
CGCGGCGAAC CGGTGCCGGC GCCGGCACCG GACATCGCCT CCCCGCTCGA GGCCGTACCG
GCCATGGACG CGGCGGAGCA GCAGCGACTG GCGGAAGAAG AGGCCGCGCG GCTCAGCGGC
GTGTTCTTTC AGGGTGGGCC ACGGCCTGCG GGCGGGCCGG ATACCGGTGC CGGGAGTGCC
GGATCGGCGT CCGGAGGATC CGGCACCATG GGAGAACCGG GAGCGACAAG CGCGCAGGAC
CGGCACGCGG CGTTTCTGGG CGCCGCCGCC GACCGCATCA CGGTGGTTCC GGATCGCGTC
GAAGCACCGG CCTCGCCCTA TATCCTGCAG GCCGGATCGG TGATCCCGGC GGCGCTGGTC
ACCGGCATCC GCTCGGACCT GCCCGGCCAG ATCATCGCCC AGGTCACCCA ACCCGTCTAT
GACAGCCCGA CCGGCTCGAT CCTGCTGATC CCGCAGGGCA CCCGCATCAT CGGCGAATAC
GATGCGGATG TCACATTCGG CCAGCGCCGC GTTCTCCTTG TCTGGAACCG GCTGATCTAT
CCGGACGGCC GCTCGCTGGT GCTGGAGCGC CTGCCGGGCG CCGACGCGTC CGGCTATGCC
GGGCTCGAGG ATGGCGTCGA TTACCACTGG GGAGAGCTGA TGAAGGTCGC AGGGCTCTCG
ACCCTGCTGG CGGTGGGCAC CGAACTCGCC GCCGGCGACG AGGAGGACCG GCTCATCCGC
GCCATCCGCG ACGGCGCCCA GGACACCGTC AACCAGGCCG GCCAGCAGAT CGTCCAGCGC
CAGCTGCAGG TCGCCCCCAC ACTCACCATC CGGCCGGGAT TCCCGGTCAG GATTCTGGTG
AGCCGGGACT TGGTCTTCGA GAACGCAGGA GGATGA
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| Protein sequence | MSDREAAAAP MRLRAEPPRV TRLSRKVLAG LGGIAALGIG AALIFALQTR DVERGGEELF
STENRTTADG LAELPRDYSG PVLGPALPGD LGKPILNARN RGEPVPAPAP DIASPLEAVP
AMDAAEQQRL AEEEAARLSG VFFQGGPRPA GGPDTGAGSA GSASGGSGTM GEPGATSAQD
RHAAFLGAAA DRITVVPDRV EAPASPYILQ AGSVIPAALV TGIRSDLPGQ IIAQVTQPVY
DSPTGSILLI PQGTRIIGEY DADVTFGQRR VLLVWNRLIY PDGRSLVLER LPGADASGYA
GLEDGVDYHW GELMKVAGLS TLLAVGTELA AGDEEDRLIR AIRDGAQDTV NQAGQQIVQR
QLQVAPTLTI RPGFPVRILV SRDLVFENAG G
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