| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0105 |
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| Symbol | |
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| ID | 4580883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 96094 |
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| End bp | 97743 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639767423 |
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| Product | recombinase |
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| Protein accession | YP_913918 |
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| Protein GI | 119382862 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0106317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG CCGCCCTTTA CGCCCGCTAT TCGGATGACA AGCAGAACGA GGCGTCCATC
GAGGACCAGT TCCGGCTCTG CCGGGAACAT GCGGGGCGGG AGCGGTGGCA GATCGTCGGT
TCCTACGAGG ATGCGGCCAT TTCCGGGGCC AGCACGATCC TGCGGCCCGG CATCCAGCGG
CTGATGCGCG ACGCACAGCA CGGCGAGTTC AGCATCCTGC TGGCCGAGGC GCTGGACCGG
ATTAGCCGCG ATCAGGCCGA TGTCGCCACG CTCTTCAAGC AGCTGAAATT CGCGGGCGTC
ACCATCGTCA CATTGGCCGA GGGAGAGATC ACGGAACTGC ATGTCGGGCT GAAAGGCACG
ATGAACGCCC TGTTCCTGAA AGACCTTGCC ATGAAGACCC ATCGCGGCCT TCGCGGGAGG
GTGGAGAAGG GCAAGTCCGG TGGTGGTCTC TGCTACGGCT ACAAGGTGGT GAAGAAGCTG
GACGGTAACG GCGAGCCGAT CCGGGGCGAC AGGGAAATCA TCCCGGAGGA AGCCGACACC
GTCCGCCGCA TCTTCCGCGA GTTCGCATCG GGCAAAAGCC CCAAGGCCAT CGCTGTCGAT
CTGAACCGGG ACGGCGTTCC CGGCCCGCTT GGCCGTGCAT GGGGCGATAC CAGCATCCGG
GGCCACCGCA ATCGCGGCAC CGGCATCGTC AACAACGAGC TTTACGCGGG CGTTCTGGTC
TGGAACCGGC TGCGCTTCGT CAAGGACCCG TCCACCGGCA AGCGCGTCTC GCGCCCGAAC
CCGGAAAGCG CATGGATCAG GACAGAGGTT CCGCATCTGC GGATCGTGGA TGATGCACTC
TGGAACGCGG TGCGCGAGCG CCAGAAGCAG ATCGCGGAAA TCTTCGGCCC GAACCTGGCG
AATACCCGCG AGGATCGCAT GAAACGGTTG CATCTGGCGA ACCGGCCCGT CTCGCTCCTT
TCCGGCCTGA TGACCTGCGG GTGTTGCGGC GGGAAGATCG GCATCATCCT GTCCGACCGT
CTCGGTTGCC TGAACCACCA CCGGCGCGGC ACCTGCACCA ACAACCGCAC TATCCTGCGC
GACAAGCTGG AAGCTCGGGT GCTGACCGGA TTACAGGAGC GACTGGTTTC CGCCGAGGCG
GTGAAGGAAG CCGTCCGCGC CTATGTCGAG GAAACCAACC GGCTGAACCA GCAGCGCCGG
ACGCAGCAGG AGACTGACCG CCGTGCGCTG GCAAAGATCG AGCGCGCCAT CGCCGGGATC
ATCGCCGCCA TTGAGGACGG GATGTATCAG CCGTCGATGA AGGCCCGGAT GGACGAGTTG
GAACGCCAGA AGGCCGAGAT TGTCGCCCGC ATGGCGGAAG CCCCTGCCGA TATGCCGGAT
GTGCATCCCA ACGTCGCTGC GAACTACAGC CGCAATGTCG CGCGTTTTGC CGAAGCCCTT
CGTGATCCTG ACGGTGGCCG CGAAGCCGCC GAAGCGCTGC GTTCCCTGAT CGGCGGGATC
ATCGTCACCC CCGGCGAGAA GCGCGGCGAG GTCCATGCCG AGCTACGCGG CGAGTTGATG
GGCATTCTCG GTATCGCCGC CGTCCAGCCG GAACAGGGGC GAACATCTGT TATGTCGCCA
GTGGCCGCAG GCCCCCGCAA CCAACGATAA
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| Protein sequence | MTRAALYARY SDDKQNEASI EDQFRLCREH AGRERWQIVG SYEDAAISGA STILRPGIQR
LMRDAQHGEF SILLAEALDR ISRDQADVAT LFKQLKFAGV TIVTLAEGEI TELHVGLKGT
MNALFLKDLA MKTHRGLRGR VEKGKSGGGL CYGYKVVKKL DGNGEPIRGD REIIPEEADT
VRRIFREFAS GKSPKAIAVD LNRDGVPGPL GRAWGDTSIR GHRNRGTGIV NNELYAGVLV
WNRLRFVKDP STGKRVSRPN PESAWIRTEV PHLRIVDDAL WNAVRERQKQ IAEIFGPNLA
NTREDRMKRL HLANRPVSLL SGLMTCGCCG GKIGIILSDR LGCLNHHRRG TCTNNRTILR
DKLEARVLTG LQERLVSAEA VKEAVRAYVE ETNRLNQQRR TQQETDRRAL AKIERAIAGI
IAAIEDGMYQ PSMKARMDEL ERQKAEIVAR MAEAPADMPD VHPNVAANYS RNVARFAEAL
RDPDGGREAA EALRSLIGGI IVTPGEKRGE VHAELRGELM GILGIAAVQP EQGRTSVMSP
VAAGPRNQR
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